Interactions for 1NAP (chain B)


Structure details

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Chemokine diagram

G K G T H C N Q V E 30s-loop K D G R 40s-loop D P D A 50s-loopN-term M S L R L D T T P S C N S A R P L H A L Q V L L L L S L L L T A L A S S T K G Q T K R N L A K G K E E S L D S D L Y A E L R C M C I K T T S G I H P K N N-termC-term D E S A D C-term I V E L S Q I V I A T L L C I K P R I K K I V Q K K L A G
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Interactions found in structure

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Chemokine Residue Generic number Segment Partner Residue Partner Interaction Type
Ala 21 59 N-term LYS 29 NEUTROPHIL ACTIVATING PEPTIDE-2 (D) Hydrophobic
Ala 21 59 N-term LYS 29 NEUTROPHIL ACTIVATING PEPTIDE-2 (D) VdWContact
Ala 21 59 N-term THR 31 NEUTROPHIL ACTIVATING PEPTIDE-2 (D) VdWContact
Ala 21 59 N-term CYS 67 NEUTROPHIL ACTIVATING PEPTIDE-2 (D) HBAcceptor
Ala 21 59 N-term CYS 67 NEUTROPHIL ACTIVATING PEPTIDE-2 (D) VdWContact
Ala 21 59 N-term THR 30 NEUTROPHIL ACTIVATING PEPTIDE-2 (D) VdWContact
Glu 22 60 N-term LYS 65 NEUTROPHIL ACTIVATING PEPTIDE-2 (D) VdWContact
Glu 22 60 N-term ARG 64 NEUTROPHIL ACTIVATING PEPTIDE-2 (D) HBAcceptor
Glu 22 60 N-term ARG 64 NEUTROPHIL ACTIVATING PEPTIDE-2 (D) Anionic
Glu 22 60 N-term ARG 64 NEUTROPHIL ACTIVATING PEPTIDE-2 (D) VdWContact
Leu 23 61 N-term LYS 65 NEUTROPHIL ACTIVATING PEPTIDE-2 (D) Hydrophobic
Leu 23 61 N-term LYS 65 NEUTROPHIL ACTIVATING PEPTIDE-2 (D) HBDonor
Leu 23 61 N-term LYS 65 NEUTROPHIL ACTIVATING PEPTIDE-2 (D) VdWContact
Leu 23 61 N-term CYS 67 NEUTROPHIL ACTIVATING PEPTIDE-2 (D) VdWContact
Leu 23 61 N-term ILE 57 NEUTROPHIL ACTIVATING PEPTIDE-2 (D) Hydrophobic
Leu 23 61 N-term ILE 57 NEUTROPHIL ACTIVATING PEPTIDE-2 (D) VdWContact
Leu 23 61 N-term LEU 26 NEUTROPHIL ACTIVATING PEPTIDE-2 (D) Hydrophobic
Met 26 66 CX LEU 26 NEUTROPHIL ACTIVATING PEPTIDE-2 (D) Hydrophobic
Met 26 66 CX LEU 23 NEUTROPHIL ACTIVATING PEPTIDE-2 (D) Hydrophobic
Gln 40 84 B1 GLY 46 NEUTROPHIL ACTIVATING PEPTIDE-2 (A) HBAcceptor
Gln 40 84 B1 GLY 46 NEUTROPHIL ACTIVATING PEPTIDE-2 (A) VdWContact
Ser 41 85 B1 VAL 44 NEUTROPHIL ACTIVATING PEPTIDE-2 (A) VdWContact
Leu 42 86 B1 VAL 44 NEUTROPHIL ACTIVATING PEPTIDE-2 (A) Hydrophobic
Leu 42 86 B1 VAL 44 NEUTROPHIL ACTIVATING PEPTIDE-2 (A) HBAcceptor
Leu 42 86 B1 VAL 44 NEUTROPHIL ACTIVATING PEPTIDE-2 (A) HBDonor
Leu 42 86 B1 VAL 44 NEUTROPHIL ACTIVATING PEPTIDE-2 (A) VdWContact
Leu 42 86 B1 GLU 43 NEUTROPHIL ACTIVATING PEPTIDE-2 (A) VdWContact
Glu 43 87 B1 GLU 43 NEUTROPHIL ACTIVATING PEPTIDE-2 (A) Hydrophobic
Glu 43 87 B1 LEU 42 NEUTROPHIL ACTIVATING PEPTIDE-2 (A) VdWContact
Val 44 88 B1 LEU 42 NEUTROPHIL ACTIVATING PEPTIDE-2 (A) HBAcceptor
Val 44 88 B1 LEU 42 NEUTROPHIL ACTIVATING PEPTIDE-2 (A) HBDonor
Val 44 88 B1 LEU 42 NEUTROPHIL ACTIVATING PEPTIDE-2 (A) VdWContact
Val 44 88 B1 LYS 82 NEUTROPHIL ACTIVATING PEPTIDE-2 (A) Hydrophobic
Val 44 88 B1 LEU 83 NEUTROPHIL ACTIVATING PEPTIDE-2 (A) Hydrophobic
Val 44 88 B1 SER 41 NEUTROPHIL ACTIVATING PEPTIDE-2 (A) VdWContact
Gly 46 90 30s-loop GLN 40 NEUTROPHIL ACTIVATING PEPTIDE-2 (A) HBDonor
Gly 46 90 30s-loop GLN 40 NEUTROPHIL ACTIVATING PEPTIDE-2 (A) VdWContact
Thr 49 93 30s-loop GLY 63 NEUTROPHIL ACTIVATING PEPTIDE-2 (D) VdWContact
Thr 49 93 30s-loop ARG 64 NEUTROPHIL ACTIVATING PEPTIDE-2 (D) VdWContact
Thr 49 93 30s-loop ASP 62 NEUTROPHIL ACTIVATING PEPTIDE-2 (D) VdWContact
His 50 94 30s-loop LYS 65 NEUTROPHIL ACTIVATING PEPTIDE-2 (D) Hydrophobic
His 50 94 30s-loop LYS 65 NEUTROPHIL ACTIVATING PEPTIDE-2 (D) VdWContact
Val 54 99 30s-loop LYS 82 NEUTROPHIL ACTIVATING PEPTIDE-2 (A) VdWContact
Val 56 101 B2 LEU 83 NEUTROPHIL ACTIVATING PEPTIDE-2 (A) Hydrophobic
Ile 57 102 B2 LEU 23 NEUTROPHIL ACTIVATING PEPTIDE-2 (D) Hydrophobic
Asp 62 112 40s-loop HIS 50 NEUTROPHIL ACTIVATING PEPTIDE-2 (D) HBAcceptor
Asp 62 112 40s-loop HIS 50 NEUTROPHIL ACTIVATING PEPTIDE-2 (D) VdWContact
Arg 64 114 40s-loop HIS 50 NEUTROPHIL ACTIVATING PEPTIDE-2 (D) Hydrophobic
Arg 64 114 40s-loop HIS 50 NEUTROPHIL ACTIVATING PEPTIDE-2 (D) VdWContact
Arg 64 114 40s-loop ALA 21 NEUTROPHIL ACTIVATING PEPTIDE-2 (D) Hydrophobic
Arg 64 114 40s-loop ALA 21 NEUTROPHIL ACTIVATING PEPTIDE-2 (D) VdWContact
Lys 65 115 B3 LEU 23 NEUTROPHIL ACTIVATING PEPTIDE-2 (D) Hydrophobic
Lys 65 115 B3 LEU 23 NEUTROPHIL ACTIVATING PEPTIDE-2 (D) HBAcceptor
Lys 65 115 B3 LEU 23 NEUTROPHIL ACTIVATING PEPTIDE-2 (D) VdWContact
Ile 66 116 B3 GLU 22 NEUTROPHIL ACTIVATING PEPTIDE-2 (D) Hydrophobic
Ile 66 116 B3 GLU 22 NEUTROPHIL ACTIVATING PEPTIDE-2 (D) VdWContact
Cys 67 117 B3 GLU 22 NEUTROPHIL ACTIVATING PEPTIDE-2 (D) Hydrophobic
Cys 67 117 B3 GLU 22 NEUTROPHIL ACTIVATING PEPTIDE-2 (D) VdWContact
Cys 67 117 B3 LEU 23 NEUTROPHIL ACTIVATING PEPTIDE-2 (D) VdWContact
Lys 76 126 Helix LEU 83 NEUTROPHIL ACTIVATING PEPTIDE-2 (A) Hydrophobic
Val 79 129 Helix VAL 79 NEUTROPHIL ACTIVATING PEPTIDE-2 (A) Hydrophobic
Val 79 129 Helix LEU 83 NEUTROPHIL ACTIVATING PEPTIDE-2 (A) Hydrophobic
Gln 80 130 Helix LYS 76 NEUTROPHIL ACTIVATING PEPTIDE-2 (A) HBDonor
Gln 80 130 Helix LYS 76 NEUTROPHIL ACTIVATING PEPTIDE-2 (A) VdWContact
Lys 82 132 Helix VAL 44 NEUTROPHIL ACTIVATING PEPTIDE-2 (A) Hydrophobic
Leu 83 133 Helix LYS 76 NEUTROPHIL ACTIVATING PEPTIDE-2 (A) Hydrophobic
Leu 83 133 Helix VAL 44 NEUTROPHIL ACTIVATING PEPTIDE-2 (A) Hydrophobic
Leu 83 133 Helix VAL 79 NEUTROPHIL ACTIVATING PEPTIDE-2 (A) Hydrophobic
Leu 83 133 Helix VAL 79 NEUTROPHIL ACTIVATING PEPTIDE-2 (A) VdWContact
Leu 83 133 Helix VAL 56 NEUTROPHIL ACTIVATING PEPTIDE-2 (A) Hydrophobic
Gly 85 135 Helix VAL 54 NEUTROPHIL ACTIVATING PEPTIDE-2 (A) VdWContact

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