Interactions for 1PLF (chain D)
Structure details
- PDB ID: 1PLF open_in_new
- Protein: CXCL4_BOVIN
- Organism: Bos taurus
- UniProt ID: P02777 open_in_new
- Method: X-ray
- Resolution: 2.2 Å
- Date: Jan. 31, 1994
- Reference: open_in_new
- State: tetramer
Chemokine diagram
Pick color:
, 'snake_.png', {scale: 3});){kind=link}
, 'snake_.jpg', {scale: 3});){kind=link}
Interactions found in structure
Download list in excel
| Chemokine Residue | Generic number | Segment | Partner Residue | Partner | Interaction Type |
|---|---|---|---|---|---|
| Glu 21 | 59 | N-term | LEU 28 | PLATELET FACTOR 4 (B) | Hydrophobic |
| Glu 21 | 59 | N-term | LEU 28 | PLATELET FACTOR 4 (B) | VdWContact |
| Glu 21 | 59 | N-term | LYS 29 | PLATELET FACTOR 4 (B) | Hydrophobic |
| Glu 21 | 59 | N-term | LYS 29 | PLATELET FACTOR 4 (B) | HBAcceptor |
| Glu 21 | 59 | N-term | LYS 29 | PLATELET FACTOR 4 (B) | Anionic |
| Glu 21 | 59 | N-term | LYS 29 | PLATELET FACTOR 4 (B) | VdWContact |
| Asp 22 | 60 | N-term | LEU 28 | PLATELET FACTOR 4 (B) | HBAcceptor |
| Asp 22 | 60 | N-term | LEU 28 | PLATELET FACTOR 4 (B) | VdWContact |
| Asp 22 | 60 | N-term | LYS 29 | PLATELET FACTOR 4 (B) | HBAcceptor |
| Asp 22 | 60 | N-term | LYS 29 | PLATELET FACTOR 4 (B) | VdWContact |
| Asp 22 | 60 | N-term | ARG 64 | PLATELET FACTOR 4 (B) | Anionic |
| Leu 23 | 61 | N-term | LYS 65 | PLATELET FACTOR 4 (B) | Hydrophobic |
| Leu 23 | 61 | N-term | ILE 57 | PLATELET FACTOR 4 (B) | Hydrophobic |
| Leu 23 | 61 | N-term | VAL 26 | PLATELET FACTOR 4 (B) | Hydrophobic |
| Leu 23 | 61 | N-term | VAL 26 | PLATELET FACTOR 4 (B) | VdWContact |
| Gln 24 | 62 | N-term | CYS 25 | PLATELET FACTOR 4 (B) | HBDonor |
| Gln 24 | 62 | N-term | CYS 25 | PLATELET FACTOR 4 (B) | VdWContact |
| Gln 24 | 62 | N-term | LEU 28 | PLATELET FACTOR 4 (B) | Hydrophobic |
| Gln 24 | 62 | N-term | VAL 26 | PLATELET FACTOR 4 (B) | HBDonor |
| Gln 24 | 62 | N-term | VAL 26 | PLATELET FACTOR 4 (B) | VdWContact |
| Cys 25 | 63 | CX | GLN 24 | PLATELET FACTOR 4 (B) | HBAcceptor |
| Cys 25 | 63 | CX | GLN 24 | PLATELET FACTOR 4 (B) | VdWContact |
| Val 26 | 66 | CX | GLN 24 | PLATELET FACTOR 4 (B) | HBAcceptor |
| Val 26 | 66 | CX | GLN 24 | PLATELET FACTOR 4 (B) | VdWContact |
| Val 26 | 66 | CX | LEU 23 | PLATELET FACTOR 4 (B) | Hydrophobic |
| Val 26 | 66 | CX | LEU 23 | PLATELET FACTOR 4 (B) | VdWContact |
| Val 26 | 66 | CX | VAL 26 | PLATELET FACTOR 4 (B) | Hydrophobic |
| Val 26 | 66 | CX | VAL 26 | PLATELET FACTOR 4 (B) | VdWContact |
| Leu 28 | 68 | N-loop | ASP 22 | PLATELET FACTOR 4 (B) | HBDonor |
| Leu 28 | 68 | N-loop | ASP 22 | PLATELET FACTOR 4 (B) | VdWContact |
| Leu 28 | 68 | N-loop | GLN 24 | PLATELET FACTOR 4 (B) | Hydrophobic |
| Leu 28 | 68 | N-loop | GLN 24 | PLATELET FACTOR 4 (B) | VdWContact |
| Lys 29 | 69 | N-loop | ASP 22 | PLATELET FACTOR 4 (B) | HBDonor |
| Lys 29 | 69 | N-loop | ASP 22 | PLATELET FACTOR 4 (B) | VdWContact |
| Lys 29 | 69 | N-loop | GLU 21 | PLATELET FACTOR 4 (B) | HBDonor |
| Lys 29 | 69 | N-loop | GLU 21 | PLATELET FACTOR 4 (B) | Cationic |
| Lys 29 | 69 | N-loop | GLU 21 | PLATELET FACTOR 4 (B) | VdWContact |
| Ser 40 | 84 | B1 | THR 62 | PLATELET FACTOR 4 (A) | HBDonor |
| Ser 40 | 84 | B1 | THR 62 | PLATELET FACTOR 4 (A) | VdWContact |
| Ser 40 | 84 | B1 | GLY 46 | PLATELET FACTOR 4 (C) | HBAcceptor |
| Ser 40 | 84 | B1 | GLY 46 | PLATELET FACTOR 4 (C) | VdWContact |
| Ser 41 | 85 | B1 | VAL 44 | PLATELET FACTOR 4 (C) | VdWContact |
| Leu 42 | 86 | B1 | VAL 44 | PLATELET FACTOR 4 (C) | HBAcceptor |
| Leu 42 | 86 | B1 | VAL 44 | PLATELET FACTOR 4 (C) | HBDonor |
| Leu 42 | 86 | B1 | VAL 44 | PLATELET FACTOR 4 (C) | VdWContact |
| Leu 42 | 86 | B1 | GLU 43 | PLATELET FACTOR 4 (C) | VdWContact |
| Glu 43 | 87 | B1 | LEU 42 | PLATELET FACTOR 4 (C) | VdWContact |
| Val 44 | 88 | B1 | LEU 42 | PLATELET FACTOR 4 (C) | HBAcceptor |
| Val 44 | 88 | B1 | LEU 42 | PLATELET FACTOR 4 (C) | HBDonor |
| Val 44 | 88 | B1 | LEU 42 | PLATELET FACTOR 4 (C) | VdWContact |
| Val 44 | 88 | B1 | SER 41 | PLATELET FACTOR 4 (C) | VdWContact |
| Val 44 | 88 | B1 | LEU 83 | PLATELET FACTOR 4 (C) | Hydrophobic |
| Val 44 | 88 | B1 | LEU 82 | PLATELET FACTOR 4 (C) | Hydrophobic |
| Gly 46 | 90 | 30s-loop | SER 40 | PLATELET FACTOR 4 (C) | HBDonor |
| Gly 46 | 90 | 30s-loop | SER 40 | PLATELET FACTOR 4 (C) | VdWContact |
| Leu 56 | 101 | B2 | LEU 83 | PLATELET FACTOR 4 (C) | Hydrophobic |
| Leu 56 | 101 | B2 | LEU 83 | PLATELET FACTOR 4 (C) | VdWContact |
| Gly 63 | 113 | 40s-loop | LYS 61 | PLATELET FACTOR 4 (A) | VdWContact |
| Lys 65 | 115 | B3 | LEU 23 | PLATELET FACTOR 4 (B) | Hydrophobic |
| Cys 67 | 117 | B3 | LEU 23 | PLATELET FACTOR 4 (B) | Hydrophobic |
| Cys 67 | 117 | B3 | LEU 23 | PLATELET FACTOR 4 (B) | VdWContact |
| Gln 70 | 120 | 50s-loop | LEU 83 | PLATELET FACTOR 4 (C) | HBDonor |
| Gln 70 | 120 | 50s-loop | LEU 83 | PLATELET FACTOR 4 (C) | VdWContact |
| Tyr 75 | 125 | Helix | LEU 83 | PLATELET FACTOR 4 (C) | Hydrophobic |
| Leu 82 | 132 | Helix | VAL 44 | PLATELET FACTOR 4 (C) | Hydrophobic |
| Leu 82 | 132 | Helix | PRO 54 | PLATELET FACTOR 4 (C) | VdWContact |
| Leu 83 | 133 | Helix | TYR 75 | PLATELET FACTOR 4 (C) | Hydrophobic |
| Leu 83 | 133 | Helix | VAL 44 | PLATELET FACTOR 4 (C) | Hydrophobic |
| Leu 83 | 133 | Helix | LEU 56 | PLATELET FACTOR 4 (C) | Hydrophobic |
| Leu 83 | 133 | Helix | LEU 56 | PLATELET FACTOR 4 (C) | VdWContact |
| Leu 83 | 133 | Helix | PRO 54 | PLATELET FACTOR 4 (C) | VdWContact |
Ligand interaction network
TCN_D_1
Interaction pattern search
Search complexes with similar interaction patterns:
