Interactions for 4HSV (chain D)
Structure details
- PDB ID: 4HSV open_in_new
- Protein: CXCL4L1_HUMAN
- Organism: Homo sapiens
- UniProt ID: P10720 open_in_new
- Method: X-ray
- Resolution: 2.08 Å
- Date: April 10, 2013
- Reference: 10.1074/JBC.M113.455329 open_in_new
- State: tetramer
Chemokine diagram
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Interactions found in structure
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| Chemokine Residue | Generic number | Segment | Partner Residue | Partner | Interaction Type |
|---|---|---|---|---|---|
| Asp 7 | 60 | N-term | LYS 14 | Platelet factor 4 variant (A) | Hydrophobic |
| Asp 7 | 60 | N-term | LYS 14 | Platelet factor 4 variant (A) | HBAcceptor |
| Asp 7 | 60 | N-term | LYS 14 | Platelet factor 4 variant (A) | Anionic |
| Asp 7 | 60 | N-term | LYS 14 | Platelet factor 4 variant (A) | VdWContact |
| Asp 7 | 60 | N-term | VAL 13 | Platelet factor 4 variant (A) | HBAcceptor |
| Asp 7 | 60 | N-term | VAL 13 | Platelet factor 4 variant (A) | VdWContact |
| Leu 8 | 61 | N-term | LEU 11 | Platelet factor 4 variant (A) | Hydrophobic |
| Leu 8 | 61 | N-term | LEU 11 | Platelet factor 4 variant (A) | VdWContact |
| Leu 8 | 61 | N-term | LYS 50 | Platelet factor 4 variant (A) | Hydrophobic |
| Gln 9 | 62 | N-term | CYS 10 | Platelet factor 4 variant (A) | HBDonor |
| Gln 9 | 62 | N-term | CYS 10 | Platelet factor 4 variant (A) | VdWContact |
| Gln 9 | 62 | N-term | VAL 13 | Platelet factor 4 variant (A) | Hydrophobic |
| Gln 9 | 62 | N-term | LEU 11 | Platelet factor 4 variant (A) | HBDonor |
| Gln 9 | 62 | N-term | LEU 11 | Platelet factor 4 variant (A) | VdWContact |
| Cys 10 | 63 | CX | GLN 9 | Platelet factor 4 variant (A) | HBAcceptor |
| Cys 10 | 63 | CX | GLN 9 | Platelet factor 4 variant (A) | VdWContact |
| Leu 11 | 66 | CX | LEU 11 | Platelet factor 4 variant (A) | Hydrophobic |
| Leu 11 | 66 | CX | LEU 11 | Platelet factor 4 variant (A) | VdWContact |
| Leu 11 | 66 | CX | GLN 9 | Platelet factor 4 variant (A) | HBAcceptor |
| Leu 11 | 66 | CX | GLN 9 | Platelet factor 4 variant (A) | VdWContact |
| Leu 11 | 66 | CX | LEU 8 | Platelet factor 4 variant (A) | Hydrophobic |
| Leu 11 | 66 | CX | LEU 8 | Platelet factor 4 variant (A) | VdWContact |
| Val 13 | 68 | N-loop | ASP 7 | Platelet factor 4 variant (A) | HBDonor |
| Val 13 | 68 | N-loop | ASP 7 | Platelet factor 4 variant (A) | VdWContact |
| Val 13 | 68 | N-loop | GLN 9 | Platelet factor 4 variant (A) | Hydrophobic |
| Val 13 | 68 | N-loop | GLN 9 | Platelet factor 4 variant (A) | VdWContact |
| Lys 14 | 69 | N-loop | ASP 7 | Platelet factor 4 variant (A) | Hydrophobic |
| Lys 14 | 69 | N-loop | ASP 7 | Platelet factor 4 variant (A) | HBDonor |
| Lys 14 | 69 | N-loop | ASP 7 | Platelet factor 4 variant (A) | VdWContact |
| Thr 16 | 71 | N-loop | ASP 7 | Platelet factor 4 variant (A) | VdWContact |
| Ile 24 | 83 | B1 | LYS 31 | Platelet factor 4 variant (C) | VdWContact |
| Thr 25 | 84 | B1 | LYS 31 | Platelet factor 4 variant (C) | HBAcceptor |
| Thr 25 | 84 | B1 | LYS 31 | Platelet factor 4 variant (C) | VdWContact |
| Thr 25 | 84 | B1 | ASN 47 | Platelet factor 4 variant (B) | HBDonor |
| Thr 25 | 84 | B1 | ASN 47 | Platelet factor 4 variant (B) | VdWContact |
| Ser 26 | 85 | B1 | VAL 29 | Platelet factor 4 variant (C) | VdWContact |
| Ser 26 | 85 | B1 | GLU 28 | Platelet factor 4 variant (C) | HBDonor |
| Ser 26 | 85 | B1 | GLU 28 | Platelet factor 4 variant (C) | VdWContact |
| Leu 27 | 86 | B1 | VAL 29 | Platelet factor 4 variant (C) | Hydrophobic |
| Leu 27 | 86 | B1 | VAL 29 | Platelet factor 4 variant (C) | HBAcceptor |
| Leu 27 | 86 | B1 | VAL 29 | Platelet factor 4 variant (C) | HBDonor |
| Leu 27 | 86 | B1 | VAL 29 | Platelet factor 4 variant (C) | VdWContact |
| Leu 27 | 86 | B1 | GLU 28 | Platelet factor 4 variant (C) | VdWContact |
| Glu 28 | 87 | B1 | LEU 27 | Platelet factor 4 variant (C) | VdWContact |
| Glu 28 | 87 | B1 | GLU 28 | Platelet factor 4 variant (C) | Hydrophobic |
| Glu 28 | 87 | B1 | GLU 28 | Platelet factor 4 variant (C) | VdWContact |
| Glu 28 | 87 | B1 | SER 26 | Platelet factor 4 variant (C) | HBAcceptor |
| Glu 28 | 87 | B1 | SER 26 | Platelet factor 4 variant (C) | VdWContact |
| Val 29 | 88 | B1 | LEU 27 | Platelet factor 4 variant (C) | HBAcceptor |
| Val 29 | 88 | B1 | LEU 27 | Platelet factor 4 variant (C) | HBDonor |
| Val 29 | 88 | B1 | LEU 27 | Platelet factor 4 variant (C) | VdWContact |
| Lys 31 | 90 | 30s-loop | ILE 24 | Platelet factor 4 variant (C) | Hydrophobic |
| Lys 31 | 90 | 30s-loop | ILE 24 | Platelet factor 4 variant (C) | HBDonor |
| Lys 31 | 90 | 30s-loop | ILE 24 | Platelet factor 4 variant (C) | VdWContact |
| Lys 31 | 90 | 30s-loop | PRO 21 | Platelet factor 4 variant (C) | VdWContact |
| Lys 31 | 90 | 30s-loop | THR 25 | Platelet factor 4 variant (C) | HBDonor |
| Lys 31 | 90 | 30s-loop | THR 25 | Platelet factor 4 variant (C) | VdWContact |
| Gly 48 | 113 | 40s-loop | LYS 46 | Platelet factor 4 variant (B) | VdWContact |
| Lys 50 | 115 | B3 | LEU 8 | Platelet factor 4 variant (A) | Hydrophobic |
| Cys 52 | 117 | B3 | ASP 7 | Platelet factor 4 variant (A) | HBDonor |
| Cys 52 | 117 | B3 | ASP 7 | Platelet factor 4 variant (A) | VdWContact |
Interaction pattern search
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