Interactions for 4RAU (chain F)


Structure details

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Chemokine diagram

K A G P H C P T A Q 30s-loop K N G R 40s-loop D L Q A 50s-loopN-term M S S A A G F C A S R P G L L F L G L L L L P L V V A F A S A E A E E D G D L Q C L C V K T T S Q V R P R H N-term I V E L S T I L I A T L L C I K P L Y K K I I K K L L E S
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Interactions found in structure

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Chemokine Residue Generic number Segment Partner Residue Partner Interaction Type
Asp 5 58 N-term LYS 95 RTOFab light chain (D) Anionic
Asp 7 60 N-term LYS 95 RTOFab light chain (D) Anionic
Arg 20 76 N-loop ARG 20 Platelet factor 4 (R) VdWContact
Pro 21 80 N-loop VAL 19 Platelet factor 4 (R) VdWContact
Pro 21 80 N-loop PRO 21 Platelet factor 4 (R) Hydrophobic
Pro 21 80 N-loop SER 17 Platelet factor 4 (R) VdWContact
Arg 22 81 N-loop GLN 18 Platelet factor 4 (R) Hydrophobic
Arg 22 81 N-loop GLN 18 Platelet factor 4 (R) VdWContact
Lys 31 90 30s-loop SER 55 RTOFab heavy chain (E) VdWContact
Ala 32 91 30s-loop TYR 106 RTOFab heavy chain (E) Hydrophobic
Ala 32 91 30s-loop TYR 106 RTOFab heavy chain (E) VdWContact
Ala 32 91 30s-loop LEU 103 RTOFab heavy chain (E) VdWContact
Gly 33 92 30s-loop TYR 106 RTOFab heavy chain (E) VdWContact
Pro 34 93 30s-loop TYR 61 RTOFab heavy chain (E) Hydrophobic
Pro 34 93 30s-loop LEU 96 RTOFab light chain (D) Hydrophobic
Pro 34 93 30s-loop TYR 98 RTOFab light chain (D) Hydrophobic
Pro 34 93 30s-loop TYR 98 RTOFab light chain (D) VdWContact
His 35 94 30s-loop TYR 61 RTOFab heavy chain (E) Hydrophobic
Pro 37 96 30s-loop TYR 106 RTOFab heavy chain (E) VdWContact
Pro 37 96 30s-loop PHE 93 RTOFab light chain (D) Hydrophobic
Pro 37 96 30s-loop PHE 93 RTOFab light chain (D) VdWContact
Pro 37 96 30s-loop TYR 34 RTOFab light chain (D) Hydrophobic
Pro 37 96 30s-loop TYR 34 RTOFab light chain (D) VdWContact
Thr 38 97 30s-loop LEU 104 RTOFab heavy chain (E) VdWContact
Ala 39 99 30s-loop LEU 104 RTOFab heavy chain (E) HBDonor
Ala 39 99 30s-loop LEU 104 RTOFab heavy chain (E) VdWContact
Ala 39 99 30s-loop LEU 103 RTOFab heavy chain (E) VdWContact
Leu 55 120 50s-loop LEU 104 RTOFab heavy chain (E) Hydrophobic
Gln 56 121 50s-loop TYR 105 RTOFab heavy chain (E) HBDonor
Gln 56 121 50s-loop TYR 105 RTOFab heavy chain (E) VdWContact
Tyr 60 125 Helix LEU 104 RTOFab heavy chain (E) Hydrophobic
Lys 62 127 Helix LYS 62 Platelet factor 4 (R) Hydrophobic
Lys 62 127 Helix LYS 62 Platelet factor 4 (R) VdWContact
Ile 63 128 Helix LEU 104 RTOFab heavy chain (E) Hydrophobic
Lys 65 130 Helix LYS 66 Platelet factor 4 (R) VdWContact
Lys 66 131 Helix LYS 61 Platelet factor 4 (R) VdWContact
Leu 68 133 Helix LEU 103 RTOFab heavy chain (E) Hydrophobic
Leu 68 133 Helix LEU 103 RTOFab heavy chain (E) VdWContact

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