Interactions for 4RAU (chain O)


Structure details

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Chemokine diagram

K A G P H C P T A Q 30s-loop K N G R 40s-loop D L Q A 50s-loopN-term M S S A A G F C A S R P G L L F L G L L L L P L V V A F A S A E A E E D G D L Q C L C V K T T S Q V R P R H N-term I V E L S T I L I A T L L C I K P L Y K K I I K K L L E S
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Interactions found in structure

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Chemokine Residue Generic number Segment Partner Residue Partner Interaction Type
Glu 4 57 N-term LYS 14 Platelet factor 4 (X) Anionic
Glu 4 57 N-term LYS 14 Platelet factor 4 (X) VdWContact
Asp 5 58 N-term THR 16 Platelet factor 4 (X) Hydrophobic
Asp 5 58 N-term THR 16 Platelet factor 4 (X) VdWContact
Gly 6 59 N-term CYS 52 Platelet factor 4 (X) HBAcceptor
Gly 6 59 N-term CYS 52 Platelet factor 4 (X) VdWContact
Asp 7 60 N-term ARG 49 Platelet factor 4 (X) Anionic
Asp 7 60 N-term ARG 49 Platelet factor 4 (X) VdWContact
Asp 7 60 N-term LYS 95 RTOFab light chain (M) Hydrophobic
Asp 7 60 N-term LYS 95 RTOFab light chain (M) VdWContact
Leu 8 61 N-term LYS 50 Platelet factor 4 (X) Hydrophobic
Leu 8 61 N-term LYS 50 Platelet factor 4 (X) HBDonor
Leu 8 61 N-term LYS 50 Platelet factor 4 (X) VdWContact
Leu 8 61 N-term ILE 42 Platelet factor 4 (X) Hydrophobic
Leu 8 61 N-term LEU 11 Platelet factor 4 (X) Hydrophobic
Leu 8 61 N-term LEU 11 Platelet factor 4 (X) VdWContact
Gln 9 62 N-term VAL 13 Platelet factor 4 (X) Hydrophobic
Gln 9 62 N-term VAL 13 Platelet factor 4 (X) VdWContact
Gln 9 62 N-term LEU 11 Platelet factor 4 (X) HBDonor
Gln 9 62 N-term LEU 11 Platelet factor 4 (X) VdWContact
Leu 11 66 CX LEU 8 Platelet factor 4 (X) Hydrophobic
Leu 11 66 CX LEU 8 Platelet factor 4 (X) VdWContact
Leu 11 66 CX LEU 11 Platelet factor 4 (X) Hydrophobic
Leu 11 66 CX GLN 9 Platelet factor 4 (X) HBAcceptor
Leu 11 66 CX GLN 9 Platelet factor 4 (X) VdWContact
Val 13 68 N-loop GLN 9 Platelet factor 4 (X) VdWContact
Lys 14 69 N-loop GLU 4 Platelet factor 4 (X) Cationic
Thr 15 70 N-loop SER 205 RTOFab light chain (A) VdWContact
Thr 16 71 N-loop GLY 6 Platelet factor 4 (X) VdWContact
Thr 16 71 N-loop ASP 5 Platelet factor 4 (X) Hydrophobic
Thr 16 71 N-loop ASP 5 Platelet factor 4 (X) VdWContact
Lys 31 90 30s-loop SER 55 RTOFab heavy chain (N) VdWContact
Ala 32 91 30s-loop LEU 103 RTOFab heavy chain (N) VdWContact
Ala 32 91 30s-loop TYR 106 RTOFab heavy chain (N) Hydrophobic
Ala 32 91 30s-loop TYR 106 RTOFab heavy chain (N) VdWContact
Pro 34 93 30s-loop TYR 98 RTOFab light chain (M) Hydrophobic
Pro 34 93 30s-loop TYR 98 RTOFab light chain (M) VdWContact
Pro 34 93 30s-loop TYR 61 RTOFab heavy chain (N) Hydrophobic
Pro 34 93 30s-loop LEU 96 RTOFab light chain (M) Hydrophobic
His 35 94 30s-loop GLY 48 Platelet factor 4 (X) HBDonor
His 35 94 30s-loop GLY 48 Platelet factor 4 (X) VdWContact
His 35 94 30s-loop LYS 50 Platelet factor 4 (X) Hydrophobic
His 35 94 30s-loop TYR 61 RTOFab heavy chain (N) Hydrophobic
His 35 94 30s-loop LYS 95 RTOFab light chain (M) VdWContact
Pro 37 96 30s-loop PHE 93 RTOFab light chain (M) Hydrophobic
Pro 37 96 30s-loop PHE 93 RTOFab light chain (M) VdWContact
Pro 37 96 30s-loop TYR 34 RTOFab light chain (M) Hydrophobic
Pro 37 96 30s-loop TYR 34 RTOFab light chain (M) VdWContact
Pro 37 96 30s-loop TYR 106 RTOFab heavy chain (N) VdWContact
Thr 38 97 30s-loop LEU 104 RTOFab heavy chain (N) VdWContact
Ala 39 99 30s-loop LEU 104 RTOFab heavy chain (N) HBDonor
Ala 39 99 30s-loop LEU 104 RTOFab heavy chain (N) VdWContact
Ala 39 99 30s-loop LEU 103 RTOFab heavy chain (N) VdWContact
Ile 42 102 B2 LEU 8 Platelet factor 4 (X) Hydrophobic
Ile 42 102 B2 LEU 8 Platelet factor 4 (X) VdWContact
Lys 46 106 40s-loop LYS 67 RTOFab heavy chain (W) HBAcceptor
Lys 46 106 40s-loop LYS 67 RTOFab heavy chain (W) VdWContact
Asn 47 112 40s-loop ASP 64 RTOFab heavy chain (W) VdWContact
Asn 47 112 40s-loop TYR 62 RTOFab heavy chain (W) VdWContact
Gly 48 113 40s-loop TYR 61 RTOFab heavy chain (W) VdWContact
Gly 48 113 40s-loop HIS 35 Platelet factor 4 (X) HBAcceptor
Gly 48 113 40s-loop HIS 35 Platelet factor 4 (X) VdWContact
Arg 49 114 40s-loop LEU 96 RTOFab light chain (V) Hydrophobic
Arg 49 114 40s-loop LEU 96 RTOFab light chain (V) VdWContact
Arg 49 114 40s-loop ASP 5 Platelet factor 4 (X) Cationic
Arg 49 114 40s-loop ASP 7 Platelet factor 4 (X) Cationic
Arg 49 114 40s-loop ASP 7 Platelet factor 4 (X) VdWContact
Lys 50 115 B3 LEU 8 Platelet factor 4 (X) Hydrophobic
Lys 50 115 B3 LEU 8 Platelet factor 4 (X) HBAcceptor
Lys 50 115 B3 LEU 8 Platelet factor 4 (X) VdWContact
Lys 50 115 B3 HIS 35 Platelet factor 4 (X) Hydrophobic
Lys 50 115 B3 HIS 35 Platelet factor 4 (X) VdWContact
Cys 52 117 B3 GLY 6 Platelet factor 4 (X) HBDonor
Cys 52 117 B3 GLY 6 Platelet factor 4 (X) VdWContact
Asp 54 119 50s-loop THR 204 RTOFab light chain (A) HBAcceptor
Asp 54 119 50s-loop THR 204 RTOFab light chain (A) VdWContact
Leu 55 120 50s-loop LEU 104 RTOFab heavy chain (N) Hydrophobic
Gln 56 121 50s-loop THR 204 RTOFab light chain (A) Hydrophobic
Gln 56 121 50s-loop THR 204 RTOFab light chain (A) VdWContact
Ile 63 128 Helix LEU 104 RTOFab heavy chain (N) Hydrophobic
Leu 68 133 Helix LEU 103 RTOFab heavy chain (N) Hydrophobic
Leu 68 133 Helix LEU 103 RTOFab heavy chain (N) VdWContact

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