Interactions for 4RAU (chain R)
Structure details
- PDB ID: 4RAU open_in_new
- Protein: CXCL4_HUMAN
- Organism: Homo sapiens
- UniProt ID: P02776 open_in_new
- Method: X-ray
- Resolution: 3.74 Å
- Date: March 16, 2016
- Reference: open_in_new
- State: monomer
Chemokine diagram
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Interactions found in structure
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| Chemokine Residue | Generic number | Segment | Partner Residue | Partner | Interaction Type |
|---|---|---|---|---|---|
| Asp 7 | 60 | N-term | LYS 95 | RTOFab light chain (P) | Hydrophobic |
| Asp 7 | 60 | N-term | LYS 95 | RTOFab light chain (P) | HBAcceptor |
| Asp 7 | 60 | N-term | LYS 95 | RTOFab light chain (P) | Anionic |
| Asp 7 | 60 | N-term | LYS 95 | RTOFab light chain (P) | VdWContact |
| Ser 17 | 72 | N-loop | PRO 21 | Platelet factor 4 (F) | VdWContact |
| Gln 18 | 74 | N-loop | ARG 22 | Platelet factor 4 (F) | Hydrophobic |
| Gln 18 | 74 | N-loop | ARG 22 | Platelet factor 4 (F) | VdWContact |
| Val 19 | 75 | N-loop | PRO 21 | Platelet factor 4 (F) | VdWContact |
| Arg 20 | 76 | N-loop | ARG 20 | Platelet factor 4 (F) | VdWContact |
| Pro 21 | 80 | N-loop | PRO 21 | Platelet factor 4 (F) | Hydrophobic |
| Lys 31 | 90 | 30s-loop | SER 55 | RTOFab heavy chain (Q) | VdWContact |
| Ala 32 | 91 | 30s-loop | LEU 103 | RTOFab heavy chain (Q) | HBDonor |
| Ala 32 | 91 | 30s-loop | LEU 103 | RTOFab heavy chain (Q) | VdWContact |
| Ala 32 | 91 | 30s-loop | TYR 106 | RTOFab heavy chain (Q) | Hydrophobic |
| Ala 32 | 91 | 30s-loop | TYR 106 | RTOFab heavy chain (Q) | VdWContact |
| Gly 33 | 92 | 30s-loop | TYR 106 | RTOFab heavy chain (Q) | VdWContact |
| Pro 34 | 93 | 30s-loop | TYR 61 | RTOFab heavy chain (Q) | Hydrophobic |
| Pro 34 | 93 | 30s-loop | LEU 96 | RTOFab light chain (P) | Hydrophobic |
| Pro 34 | 93 | 30s-loop | TYR 98 | RTOFab light chain (P) | Hydrophobic |
| Pro 34 | 93 | 30s-loop | TYR 98 | RTOFab light chain (P) | VdWContact |
| His 35 | 94 | 30s-loop | TYR 61 | RTOFab heavy chain (Q) | Hydrophobic |
| Pro 37 | 96 | 30s-loop | PHE 93 | RTOFab light chain (P) | Hydrophobic |
| Pro 37 | 96 | 30s-loop | PHE 93 | RTOFab light chain (P) | VdWContact |
| Pro 37 | 96 | 30s-loop | TYR 34 | RTOFab light chain (P) | Hydrophobic |
| Pro 37 | 96 | 30s-loop | TYR 34 | RTOFab light chain (P) | VdWContact |
| Thr 38 | 97 | 30s-loop | TYR 34 | RTOFab light chain (P) | Hydrophobic |
| Thr 38 | 97 | 30s-loop | TYR 34 | RTOFab light chain (P) | VdWContact |
| Ala 39 | 99 | 30s-loop | LEU 103 | RTOFab heavy chain (Q) | VdWContact |
| Ala 39 | 99 | 30s-loop | LEU 104 | RTOFab heavy chain (Q) | HBDonor |
| Ala 39 | 99 | 30s-loop | LEU 104 | RTOFab heavy chain (Q) | VdWContact |
| Lys 61 | 126 | Helix | LYS 66 | Platelet factor 4 (F) | VdWContact |
| Lys 62 | 127 | Helix | LYS 62 | Platelet factor 4 (F) | Hydrophobic |
| Lys 62 | 127 | Helix | LYS 62 | Platelet factor 4 (F) | VdWContact |
| Ile 63 | 128 | Helix | LEU 104 | RTOFab heavy chain (Q) | Hydrophobic |
| Lys 66 | 131 | Helix | LYS 65 | Platelet factor 4 (F) | VdWContact |
| Leu 68 | 133 | Helix | LEU 103 | RTOFab heavy chain (Q) | Hydrophobic |
| Leu 68 | 133 | Helix | LEU 103 | RTOFab heavy chain (Q) | VdWContact |
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