Interactions for 5EKI (chain B)


Structure details

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Chemokine diagram

E P S L G C S I P A 30s-loop R K R S Q A 40s-loop D P K E 50s-loopN-term M A Q S L A L S L L I L V L A F G I P R T Q G S D G G A Q D C C L K Y S Q R K I P A K V N-termC-term P S P Q K P A Q G C R K D R G A S K T G K K G K G S K G C K R T E R S Q T P K G P C-term Q K R Y S R V I L F L P A C L E L W V Q Q L M Q H L D K T
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Interactions found in structure

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Chemokine Residue Generic number Segment Partner Residue Partner Interaction Type
Asp 7 62 N-term ARG 26 C-C motif chemokine 21 (E) HBAcceptor
Asp 7 62 N-term ARG 26 C-C motif chemokine 21 (E) Anionic
Asp 7 62 N-term ARG 26 C-C motif chemokine 21 (E) VdWContact
Asp 7 62 N-term PRO 73 C-C motif chemokine 21 (E) Hydrophobic
Asp 7 62 N-term GLN 74 C-C motif chemokine 21 (E) VdWContact
Cys 8 63 CX GLN 74 C-C motif chemokine 21 (E) HBAcceptor
Cys 8 63 CX GLN 74 C-C motif chemokine 21 (E) HBDonor
Cys 8 63 CX GLN 74 C-C motif chemokine 21 (E) VdWContact
Leu 10 68 N-loop ALA 77 C-C motif chemokine 21 (E) Hydrophobic
Leu 10 68 N-loop GLN 74 C-C motif chemokine 21 (E) Hydrophobic
Leu 10 68 N-loop GLN 74 C-C motif chemokine 21 (E) VdWContact
Lys 11 69 N-loop PRO 71 C-C motif chemokine 21 (E) Hydrophobic
Lys 11 69 N-loop ASP 68 C-C motif chemokine 21 (E) Hydrophobic
Lys 11 69 N-loop ASP 68 C-C motif chemokine 21 (E) Cationic
Ser 13 71 N-loop PRO 71 C-C motif chemokine 21 (E) VdWContact
Gln 14 72 N-loop LYS 69 C-C motif chemokine 21 (E) HBDonor
Gln 14 72 N-loop LYS 69 C-C motif chemokine 21 (E) VdWContact
Arg 15 73 N-loop THR 70 C-C motif chemokine 21 (E) Hydrophobic
Arg 15 73 N-loop THR 70 C-C motif chemokine 21 (E) VdWContact
Arg 23 84 B1 ALA 49 C-C motif chemokine 21 (C) Hydrophobic
Arg 23 84 B1 ARG 46 C-C motif chemokine 21 (C) VdWContact
Arg 23 84 B1 GLN 48 C-C motif chemokine 21 (C) HBDonor
Arg 23 84 B1 GLN 48 C-C motif chemokine 21 (C) VdWContact
Gly 33 94 30s-loop ALA 77 C-C motif chemokine 21 (E) VdWContact
Leu 40 102 B2 PRO 73 C-C motif chemokine 21 (E) Hydrophobic
Arg 44 106 40s-loop SER 47 C-C motif chemokine 21 (C) VdWContact
Arg 46 108 40s-loop ARG 46 C-C motif chemokine 21 (E) VdWContact
Ser 47 109 40s-loop ARG 44 C-C motif chemokine 21 (E) HBAcceptor
Ser 47 109 40s-loop ARG 44 C-C motif chemokine 21 (E) VdWContact
Gln 48 113 40s-loop ARG 46 C-C motif chemokine 21 (E) HBAcceptor
Gln 48 113 40s-loop ARG 46 C-C motif chemokine 21 (E) VdWContact
Ala 49 114 40s-loop ARG 23 C-C motif chemokine 21 (E) Hydrophobic
Glu 50 115 B3 PRO 73 C-C motif chemokine 21 (E) Hydrophobic
Glu 50 115 B3 SER 72 C-C motif chemokine 21 (E) VdWContact
Leu 51 116 B3 THR 70 C-C motif chemokine 21 (E) Hydrophobic
Leu 51 116 B3 THR 70 C-C motif chemokine 21 (E) VdWContact
Leu 51 116 B3 PRO 71 C-C motif chemokine 21 (E) VdWContact
Cys 52 117 B3 PRO 71 C-C motif chemokine 21 (E) Hydrophobic
Cys 52 117 B3 PRO 71 C-C motif chemokine 21 (E) HBDonor
Cys 52 117 B3 PRO 71 C-C motif chemokine 21 (E) VdWContact
Asp 68 133 Helix LYS 11 C-C motif chemokine 21 (C) Hydrophobic
Asp 68 133 Helix LYS 11 C-C motif chemokine 21 (C) Anionic
Lys 69 134 Helix GLN 14 C-C motif chemokine 21 (C) Hydrophobic
Lys 69 134 Helix GLN 14 C-C motif chemokine 21 (C) HBAcceptor
Lys 69 134 Helix GLN 14 C-C motif chemokine 21 (C) VdWContact
Thr 70 135 Helix ARG 15 C-C motif chemokine 21 (C) Hydrophobic
Thr 70 135 Helix LEU 51 C-C motif chemokine 21 (C) Hydrophobic
Pro 71 136 C-term SER 13 C-C motif chemokine 21 (C) VdWContact
Pro 71 136 C-term LYS 11 C-C motif chemokine 21 (C) Hydrophobic
Pro 71 136 C-term CYS 52 C-C motif chemokine 21 (C) Hydrophobic
Pro 71 136 C-term CYS 52 C-C motif chemokine 21 (C) HBAcceptor
Pro 71 136 C-term CYS 52 C-C motif chemokine 21 (C) VdWContact
Pro 73 138 C-term GLU 50 C-C motif chemokine 21 (C) Hydrophobic
Pro 73 138 C-term ASP 7 C-C motif chemokine 21 (C) Hydrophobic
Pro 73 138 C-term LEU 40 C-C motif chemokine 21 (C) Hydrophobic
Gln 74 139 C-term ASP 7 C-C motif chemokine 21 (C) VdWContact
Gln 74 139 C-term CYS 8 C-C motif chemokine 21 (C) HBAcceptor
Gln 74 139 C-term CYS 8 C-C motif chemokine 21 (C) HBDonor
Gln 74 139 C-term CYS 8 C-C motif chemokine 21 (C) VdWContact
Gln 74 139 C-term LEU 10 C-C motif chemokine 21 (C) Hydrophobic

Ligand interaction network

SO4_A_101

SO4_B_101

SO4_C_101

SO4_E_101

SO4_F_101

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