Interactions for 5LTL (chain A)
Structure details
- PDB ID: 5LTL open_in_new
- Protein: CCL16_HUMAN
- Organism: Homo sapiens
- UniProt ID: O15467 open_in_new
- Method: X-ray
- Resolution: 1.45 Å
- Date: May 9, 2018
- Reference: open_in_new
- State: dimer
Chemokine diagram
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Interactions found in structure
Download list in excel
| Chemokine Residue | Generic number | Segment | Partner Residue | Partner | Interaction Type |
|---|---|---|---|---|---|
| Asn 9 | 58 | N-term | TYR 19 | C-C motif chemokine 16 (B) | Hydrophobic |
| Asn 9 | 58 | N-term | TYR 19 | C-C motif chemokine 16 (B) | VdWContact |
| Asn 9 | 58 | N-term | CYS 53 | C-C motif chemokine 16 (B) | HBAcceptor |
| Asn 9 | 58 | N-term | CYS 53 | C-C motif chemokine 16 (B) | VdWContact |
| Pro 11 | 60 | N-term | THR 13 | C-C motif chemokine 16 (B) | Hydrophobic |
| Pro 11 | 60 | N-term | ILE 43 | C-C motif chemokine 16 (B) | Hydrophobic |
| Pro 11 | 60 | N-term | GLU 51 | C-C motif chemokine 16 (B) | Hydrophobic |
| Ser 12 | 61 | N-term | CYS 14 | C-C motif chemokine 16 (B) | HBAcceptor |
| Ser 12 | 61 | N-term | CYS 14 | C-C motif chemokine 16 (B) | HBDonor |
| Ser 12 | 61 | N-term | CYS 14 | C-C motif chemokine 16 (B) | VdWContact |
| Ser 12 | 61 | N-term | THR 13 | C-C motif chemokine 16 (B) | VdWContact |
| Thr 13 | 62 | N-term | SER 12 | C-C motif chemokine 16 (B) | VdWContact |
| Thr 13 | 62 | N-term | PRO 11 | C-C motif chemokine 16 (B) | Hydrophobic |
| Thr 13 | 62 | N-term | PRO 11 | C-C motif chemokine 16 (B) | VdWContact |
| Cys 14 | 63 | CX | SER 12 | C-C motif chemokine 16 (B) | HBAcceptor |
| Cys 14 | 63 | CX | SER 12 | C-C motif chemokine 16 (B) | HBDonor |
| Cys 14 | 63 | CX | SER 12 | C-C motif chemokine 16 (B) | VdWContact |
| Cys 14 | 63 | CX | CYS 14 | C-C motif chemokine 16 (B) | Hydrophobic |
| Lys 17 | 69 | N-loop | ASN 9 | C-C motif chemokine 16 (B) | HBDonor |
| Lys 17 | 69 | N-loop | ASN 9 | C-C motif chemokine 16 (B) | VdWContact |
| Lys 17 | 69 | N-loop | VAL 8 | C-C motif chemokine 16 (B) | VdWContact |
| Tyr 19 | 71 | N-loop | ASN 9 | C-C motif chemokine 16 (B) | Hydrophobic |
| Tyr 19 | 71 | N-loop | ASN 9 | C-C motif chemokine 16 (B) | VdWContact |
| His 38 | 96 | 30s-loop | HIS 38 | C-C motif chemokine 16 (B) | Hydrophobic |
| His 38 | 96 | 30s-loop | HIS 38 | C-C motif chemokine 16 (B) | PiStacking |
| Ile 43 | 102 | B2 | PRO 11 | C-C motif chemokine 16 (B) | Hydrophobic |
| Glu 51 | 115 | B3 | THR 10 | C-C motif chemokine 16 (B) | VdWContact |
| Glu 51 | 115 | B3 | PRO 11 | C-C motif chemokine 16 (B) | Hydrophobic |
| Cys 53 | 117 | B3 | ASN 9 | C-C motif chemokine 16 (B) | HBDonor |
| Cys 53 | 117 | B3 | ASN 9 | C-C motif chemokine 16 (B) | VdWContact |
Ligand interaction network
GOL_B_101
Interaction pattern search
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