Interactions for 1CM9 — Binding Partner: CXCL2
Structure details
- PDB ID: 1CM9 open_in_new
- Protein: CXCL2_HHV8P
- Organism: Human herpesvirus 8 type P (isolate GK18)
- UniProt ID: Q98157 open_in_new
- Method: X-ray
- Resolution: 2.1 Å
- Date: June 24, 1999
- Reference: 10.1021/BI001166F open_in_new
- State: Dimer
- Chemokine Chain: B
- Partner Chain: A
Chemokine diagram
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Interactions for this Binding Partner
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Chemokine Residue | Generic Number | Segment | Partner Residue | Partner Chain | Interaction Type |
---|---|---|---|---|---|
Trp 8 | 57 | N-term | GLN 19 | A | VdWContact |
Trp 8 | 57 | N-term | ARG 21 | A | Anionic |
His 9 | 58 | N-term | CYS 54 | A | Hydrophobic |
His 9 | 58 | N-term | CYS 54 | A | HBAcceptor |
His 9 | 58 | N-term | CYS 54 | A | VdWContact |
His 9 | 58 | N-term | GLN 19 | A | Hydrophobic |
His 9 | 58 | N-term | GLN 19 | A | VdWContact |
His 9 | 58 | N-term | TYR 18 | A | VdWContact |
Arg 10 | 59 | N-term | GLN 52 | A | VdWContact |
Pro 11 | 60 | N-term | CYS 54 | A | VdWContact |
Pro 11 | 60 | N-term | LYS 13 | A | Hydrophobic |
Pro 11 | 60 | N-term | ILE 44 | A | Hydrophobic |
Pro 11 | 60 | N-term | ILE 44 | A | VdWContact |
Pro 11 | 60 | N-term | GLN 52 | A | Hydrophobic |
Asp 12 | 61 | N-term | LEU 16 | A | Hydrophobic |
Asp 12 | 61 | N-term | CYS 14 | A | HBAcceptor |
Asp 12 | 61 | N-term | CYS 14 | A | HBDonor |
Asp 12 | 61 | N-term | CYS 14 | A | VdWContact |
Lys 13 | 62 | N-term | LYS 13 | A | Hydrophobic |
Lys 13 | 62 | N-term | ASP 12 | A | VdWContact |
Lys 13 | 62 | N-term | PRO 11 | A | Hydrophobic |
Cys 14 | 63 | CX | ASP 12 | A | HBAcceptor |
Cys 14 | 63 | CX | ASP 12 | A | HBDonor |
Cys 14 | 63 | CX | ASP 12 | A | VdWContact |
Cys 14 | 63 | CX | CYS 14 | A | Hydrophobic |
Leu 16 | 68 | N-loop | LEU 37 | A | Hydrophobic |
Leu 16 | 68 | N-loop | LEU 37 | A | VdWContact |
Leu 16 | 68 | N-loop | ASP 12 | A | VdWContact |
Leu 16 | 68 | N-loop | SER 35 | A | VdWContact |
Gly 17 | 69 | N-loop | HIS 9 | A | VdWContact |
Tyr 18 | 70 | N-loop | HIS 9 | A | HBAcceptor |
Tyr 18 | 70 | N-loop | HIS 9 | A | VdWContact |
Gln 19 | 71 | N-loop | SER 7 | A | VdWContact |
Leu 37 | 94 | 30s-loop | LEU 16 | A | Hydrophobic |
Ser 39 | 96 | 30s-loop | SER 39 | A | VdWContact |
Ile 44 | 102 | B2 | PRO 11 | A | Hydrophobic |
Gln 52 | 115 | B3 | ARG 10 | A | VdWContact |
Gln 52 | 115 | B3 | PRO 11 | A | Hydrophobic |
Val 53 | 116 | B3 | HIS 9 | A | Hydrophobic |
Cys 54 | 117 | B3 | PRO 11 | A | VdWContact |