Interactions for 1CM9 — Binding Partner: CXCL2
Structure details
- PDB ID: 1CM9 open_in_new
- Protein: CXCL2_HHV8P
- Organism: Human herpesvirus 8 type P (isolate GK18)
- UniProt ID: Q98157 open_in_new
- Method: X-ray
- Resolution: 2.1 Å
- Date: June 24, 1999
- Reference: 10.1021/BI001166F open_in_new
- State: Dimer
- Chemokine Chain: B
- Partner Chain: A
Chemokine diagram
Interactions for this Binding Partner
Download list as CSV
Chemokine Residue | Generic Number | Segment | Partner Residue | Partner Chain | Interaction Type |
---|---|---|---|---|---|
Trp 8 | NTc.Cm6 | N-term | GLN 19 | A | VdWContact |
Trp 8 | NTc.Cm6 | N-term | ARG 21 | A | Anionic |
His 9 | NTc.Cm5 | N-term | CYS 54 | A | Hydrophobic |
His 9 | NTc.Cm5 | N-term | CYS 54 | A | HBAcceptor |
His 9 | NTc.Cm5 | N-term | CYS 54 | A | VdWContact |
His 9 | NTc.Cm5 | N-term | GLN 19 | A | Hydrophobic |
His 9 | NTc.Cm5 | N-term | GLN 19 | A | VdWContact |
His 9 | NTc.Cm5 | N-term | TYR 18 | A | VdWContact |
Arg 10 | NTc.Cm4 | N-term | GLN 52 | A | VdWContact |
Pro 11 | NTc.Cm3 | N-term | CYS 54 | A | VdWContact |
Pro 11 | NTc.Cm3 | N-term | LYS 13 | A | Hydrophobic |
Pro 11 | NTc.Cm3 | N-term | ILE 44 | A | Hydrophobic |
Pro 11 | NTc.Cm3 | N-term | ILE 44 | A | VdWContact |
Pro 11 | NTc.Cm3 | N-term | GLN 52 | A | Hydrophobic |
Asp 12 | NTc.Cm2 | N-term | LEU 16 | A | Hydrophobic |
Asp 12 | NTc.Cm2 | N-term | CYS 14 | A | HBAcceptor |
Asp 12 | NTc.Cm2 | N-term | CYS 14 | A | HBDonor |
Asp 12 | NTc.Cm2 | N-term | CYS 14 | A | VdWContact |
Lys 13 | NTc.Cm1 | N-term | LYS 13 | A | Hydrophobic |
Lys 13 | NTc.Cm1 | N-term | ASP 12 | A | VdWContact |
Lys 13 | NTc.Cm1 | N-term | PRO 11 | A | Hydrophobic |
Cys 14 | CX.1 | CX | ASP 12 | A | HBAcceptor |
Cys 14 | CX.1 | CX | ASP 12 | A | HBDonor |
Cys 14 | CX.1 | CX | ASP 12 | A | VdWContact |
Cys 14 | CX.1 | CX | CYS 14 | A | Hydrophobic |
Leu 16 | cxb1.1 | N-loop | LEU 37 | A | Hydrophobic |
Leu 16 | cxb1.1 | N-loop | LEU 37 | A | VdWContact |
Leu 16 | cxb1.1 | N-loop | ASP 12 | A | VdWContact |
Leu 16 | cxb1.1 | N-loop | SER 35 | A | VdWContact |
Gly 17 | cxb1.2 | N-loop | HIS 9 | A | VdWContact |
Tyr 18 | cxb1.5 | N-loop | HIS 9 | A | HBAcceptor |
Tyr 18 | cxb1.5 | N-loop | HIS 9 | A | VdWContact |
Gln 19 | cxb1.6 | N-loop | SER 7 | A | VdWContact |
Leu 37 | b1b2.10 | 30s-loop | LEU 16 | A | Hydrophobic |
Ser 39 | b1b2.13 | 30s-loop | SER 39 | A | VdWContact |
Ile 44 | B2.3 | B2 | PRO 11 | A | Hydrophobic |
Gln 52 | B3.1 | B3 | ARG 10 | A | VdWContact |
Gln 52 | B3.1 | B3 | PRO 11 | A | Hydrophobic |
Val 53 | B3.2 | B3 | HIS 9 | A | Hydrophobic |
Cys 54 | B3.3 | B3 | PRO 11 | A | VdWContact |