Interactions for 1DOM — Binding Partner: CCL2
Structure details
- PDB ID: 1DOM open_in_new
- Protein: CCL2_HUMAN
- Organism: Homo sapiens
- UniProt ID: P13500 open_in_new
- Method: Nmr
- Resolution:
- Date: Oct. 14, 1996
- Reference: 10.1021/BI9602270 open_in_new
- State: Dimer
- Chemokine Chain: B
- Partner Chain: A
Chemokine diagram
Interactions for this Binding Partner
Download list as CSV
| Chemokine Residue | Generic Number | Segment | Partner Residue | Partner Chain | Interaction Type |
|---|---|---|---|---|---|
| Ala 4 | NTc.Cm7 | N-term | LYS 49 | A | Hydrophobic |
| Ile 5 | NTc.Cm6 | N-term | ASN 14 | A | Hydrophobic |
| Ile 5 | NTc.Cm6 | N-term | ASN 14 | A | VdWContact |
| Asn 6 | NTc.Cm5 | N-term | CYS 52 | A | HBAcceptor |
| Asn 6 | NTc.Cm5 | N-term | CYS 52 | A | VdWContact |
| Asn 6 | NTc.Cm5 | N-term | ASN 14 | A | Hydrophobic |
| Asn 6 | NTc.Cm5 | N-term | ASN 14 | A | VdWContact |
| Asn 6 | NTc.Cm5 | N-term | ILE 51 | A | Hydrophobic |
| Asn 6 | NTc.Cm5 | N-term | ILE 51 | A | VdWContact |
| Asn 6 | NTc.Cm5 | N-term | PHE 15 | A | VdWContact |
| Asn 6 | NTc.Cm5 | N-term | THR 16 | A | Hydrophobic |
| Asn 6 | NTc.Cm5 | N-term | THR 16 | A | VdWContact |
| Ala 7 | NTc.Cm4 | N-term | GLU 50 | A | VdWContact |
| Pro 8 | NTc.Cm3 | N-term | CYS 52 | A | VdWContact |
| Pro 8 | NTc.Cm3 | N-term | GLU 50 | A | Hydrophobic |
| Pro 8 | NTc.Cm3 | N-term | GLU 50 | A | VdWContact |
| Pro 8 | NTc.Cm3 | N-term | CYS 11 | A | VdWContact |
| Pro 8 | NTc.Cm3 | N-term | ILE 31 | A | Hydrophobic |
| Pro 8 | NTc.Cm3 | N-term | ILE 42 | A | Hydrophobic |
| Pro 8 | NTc.Cm3 | N-term | ILE 42 | A | VdWContact |
| Val 9 | NTc.Cm2 | N-term | CYS 11 | A | VdWContact |
| Val 9 | NTc.Cm2 | N-term | TYR 13 | A | Hydrophobic |
| Val 9 | NTc.Cm2 | N-term | TYR 13 | A | VdWContact |
| Val 9 | NTc.Cm2 | N-term | CYS 12 | A | VdWContact |
| Thr 10 | NTc.Cm1 | N-term | THR 10 | A | Hydrophobic |
| Thr 10 | NTc.Cm1 | N-term | THR 10 | A | VdWContact |
| Cys 11 | CX.1 | CX | VAL 9 | A | VdWContact |
| Cys 11 | CX.1 | CX | PRO 8 | A | VdWContact |
| Cys 12 | CX.5 | CX | VAL 9 | A | VdWContact |
| Tyr 13 | cxb1.1 | N-loop | LYS 35 | A | Hydrophobic |
| Tyr 13 | cxb1.1 | N-loop | LYS 35 | A | VdWContact |
| Tyr 13 | cxb1.1 | N-loop | PRO 37 | A | VdWContact |
| Tyr 13 | cxb1.1 | N-loop | VAL 9 | A | Hydrophobic |
| Tyr 13 | cxb1.1 | N-loop | VAL 9 | A | VdWContact |
| Asn 14 | cxb1.2 | N-loop | ASN 6 | A | Hydrophobic |
| Asn 14 | cxb1.2 | N-loop | ASN 6 | A | VdWContact |
| Asn 14 | cxb1.2 | N-loop | ILE 5 | A | Hydrophobic |
| Asn 14 | cxb1.2 | N-loop | ILE 5 | A | VdWContact |
| Phe 15 | cxb1.5 | N-loop | ASN 6 | A | VdWContact |
| Thr 16 | cxb1.6 | N-loop | ASN 6 | A | Hydrophobic |
| Thr 16 | cxb1.6 | N-loop | ASN 6 | A | VdWContact |
| Ile 31 | b1b2.4 | 30s-loop | PRO 8 | A | Hydrophobic |
| Lys 35 | b1b2.10 | 30s-loop | TYR 13 | A | Hydrophobic |
| Lys 35 | b1b2.10 | 30s-loop | TYR 13 | A | VdWContact |
| Pro 37 | b1b2.13 | 30s-loop | TYR 13 | A | VdWContact |
| Ile 42 | B2.3 | B2 | PRO 8 | A | Hydrophobic |
| Ile 42 | B2.3 | B2 | PRO 8 | A | VdWContact |
| Lys 49 | b2b3.12 | 40s-loop | ALA 4 | A | Hydrophobic |
| Glu 50 | B3.1 | B3 | ALA 7 | A | VdWContact |
| Glu 50 | B3.1 | B3 | PRO 8 | A | Hydrophobic |
| Glu 50 | B3.1 | B3 | PRO 8 | A | VdWContact |
| Ile 51 | B3.2 | B3 | ASN 6 | A | Hydrophobic |
| Ile 51 | B3.2 | B3 | ASN 6 | A | VdWContact |
| Cys 52 | B3.3 | B3 | PRO 8 | A | VdWContact |
| Cys 52 | B3.3 | B3 | ASN 6 | A | HBDonor |
| Cys 52 | B3.3 | B3 | ASN 6 | A | VdWContact |
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