Interactions

2RA4 | CCL13_HUMAN — CCL13

Residue contacts: 61
SUMMARY
Protein
CCL13_HUMAN View protein entry
Organism
Homo sapiens
UniProt ID
Q99616 View on UniProt
PDB ID
2RA4 View on PDB
Method
X-ray
Resolution
1.7 Å
Date
March 18, 2008
Reference
10.1107/S0907444907066164 Open DOI
State
Dimer
Chain information
Chemokine chain
B
Partner chain
A
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INTERACTION TABLE
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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Asp 3 NTc.Cm8 N-term LYS 18 A Hydrophobic
Ala 4 NTc.Cm7 N-term LYS 18 A HBAcceptor
Ala 4 NTc.Cm7 N-term LYS 18 A VdWContact
Ala 4 NTc.Cm7 N-term SER 17 A HBAcceptor
Ala 4 NTc.Cm7 N-term SER 17 A HBDonor
Ala 4 NTc.Cm7 N-term SER 17 A VdWContact
Leu 5 NTc.Cm6 N-term LYS 18 A Hydrophobic
Leu 5 NTc.Cm6 N-term LYS 18 A VdWContact
Leu 5 NTc.Cm6 N-term ILE 50 A Hydrophobic
Leu 5 NTc.Cm6 N-term ILE 50 A VdWContact
Leu 5 NTc.Cm6 N-term LYS 48 A Hydrophobic
Leu 5 NTc.Cm6 N-term ILE 20 A Hydrophobic
Asn 6 NTc.Cm5 N-term SER 16 A HBDonor
Asn 6 NTc.Cm5 N-term SER 16 A VdWContact
Asn 6 NTc.Cm5 N-term CYS 51 A HBAcceptor
Asn 6 NTc.Cm5 N-term CYS 51 A VdWContact
Asn 6 NTc.Cm5 N-term THR 14 A HBAcceptor
Asn 6 NTc.Cm5 N-term THR 14 A VdWContact
Val 7 NTc.Cm4 N-term GLU 49 A VdWContact
Pro 8 NTc.Cm3 N-term THR 10 A Hydrophobic
Pro 8 NTc.Cm3 N-term THR 10 A VdWContact
Pro 8 NTc.Cm3 N-term CYS 51 A VdWContact
Pro 8 NTc.Cm3 N-term ILE 41 A Hydrophobic
Pro 8 NTc.Cm3 N-term GLU 49 A Hydrophobic
Ser 9 NTc.Cm2 N-term PHE 13 A VdWContact
Ser 9 NTc.Cm2 N-term CYS 11 A HBAcceptor
Ser 9 NTc.Cm2 N-term CYS 11 A HBDonor
Ser 9 NTc.Cm2 N-term CYS 11 A VdWContact
Ser 9 NTc.Cm2 N-term THR 10 A VdWContact
Thr 10 NTc.Cm1 N-term PRO 8 A Hydrophobic
Thr 10 NTc.Cm1 N-term PRO 8 A VdWContact
Thr 10 NTc.Cm1 N-term SER 9 A VdWContact
Cys 11 CX.1 CX SER 9 A HBAcceptor
Cys 11 CX.1 CX SER 9 A HBDonor
Cys 11 CX.1 CX SER 9 A VdWContact
Phe 13 cxb1.1 N-loop ARG 34 A Hydrophobic
Phe 13 cxb1.1 N-loop ARG 34 A VdWContact
Phe 13 cxb1.1 N-loop SER 9 A VdWContact
Thr 14 cxb1.2 N-loop ASN 6 A VdWContact
Ser 16 cxb1.6 N-loop ASN 6 A HBAcceptor
Ser 16 cxb1.6 N-loop ASN 6 A VdWContact
Ser 17 cxb1.7 N-loop ALA 4 A HBAcceptor
Ser 17 cxb1.7 N-loop ALA 4 A HBDonor
Ser 17 cxb1.7 N-loop ALA 4 A VdWContact
Lys 18 cxb1.8 N-loop ASP 3 A Hydrophobic
Lys 18 cxb1.8 N-loop LEU 5 A Hydrophobic
Lys 18 cxb1.8 N-loop LEU 5 A VdWContact
Lys 18 cxb1.8 N-loop ALA 4 A HBDonor
Lys 18 cxb1.8 N-loop ALA 4 A VdWContact
Ile 20 cxb1.11 N-loop LEU 5 A Hydrophobic
Arg 34 b1b2.10 30s-loop PHE 13 A Hydrophobic
Pro 36 b1b2.13 30s-loop PRO 36 A Hydrophobic
Ile 41 B2.3 B2 PRO 8 A Hydrophobic
Glu 49 B3.1 B3 VAL 7 A VdWContact
Glu 49 B3.1 B3 PRO 8 A Hydrophobic
Ile 50 B3.2 B3 LEU 5 A Hydrophobic
Ile 50 B3.2 B3 LEU 5 A VdWContact
Cys 51 B3.3 B3 ASN 6 A HBDonor
Cys 51 B3.3 B3 ASN 6 A VdWContact
Cys 51 B3.3 B3 VAL 7 A VdWContact
Cys 51 B3.3 B3 PRO 8 A VdWContact
CHEMOKINE DIAGRAM
T T S R C P Q K 30s-loop K L G K 40s-loop D P K E 50s-loopC-term D A L N V P S T C C F T F S S K K I S L Q N-term I V Y S K L R A V I F R T A C I E K W V Q N Y M K H L G
INTERACTION PATTERN SEARCH
0.00 = no similarity, 1.00 = identical