Interactions for 1HRJ — Binding Partner: CCL5


Structure details

  • Chemokine Chain: A
  • Partner Chain: B
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Chemokine diagram

S G K C S N P A 30s-loop R K N R 40s-loop N P E K 50s-loopC-term S P Y S S D T T P C C F A Y I A R P L P R A H N-term T Y F Y E K I V V F V T A C V Q K W V R E Y I N S L E M S
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Interactions for this Binding Partner

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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Ser 4 57 N-term ALA 13 B VdWContact
Ser 5 58 N-term ALA 13 B VdWContact
Ser 5 58 N-term ILE 15 B VdWContact
Ser 5 58 N-term TYR 14 B VdWContact
Ser 5 58 N-term CYS 50 B HBAcceptor
Ser 5 58 N-term CYS 50 B VdWContact
Ser 5 58 N-term VAL 49 B VdWContact
Asp 6 59 N-term GLN 48 B VdWContact
Asp 6 59 N-term CYS 50 B VdWContact
Asp 6 59 N-term VAL 49 B VdWContact
Thr 7 60 N-term GLN 48 B Hydrophobic
Thr 7 60 N-term GLN 48 B VdWContact
Thr 7 60 N-term CYS 10 B HBDonor
Thr 7 60 N-term CYS 10 B VdWContact
Thr 8 61 N-term PHE 12 B Hydrophobic
Thr 8 61 N-term PHE 12 B HBDonor
Thr 8 61 N-term PHE 12 B VdWContact
Thr 8 61 N-term CYS 10 B HBDonor
Thr 8 61 N-term CYS 10 B VdWContact
Thr 8 61 N-term CYS 11 B VdWContact
Cys 10 63 CX THR 7 B HBAcceptor
Cys 10 63 CX THR 7 B VdWContact
Cys 10 63 CX THR 8 B HBAcceptor
Cys 10 63 CX THR 8 B VdWContact
Cys 11 67 CX THR 8 B VdWContact
Phe 12 68 N-loop LYS 33 B Hydrophobic
Phe 12 68 N-loop LYS 33 B PiCation
Phe 12 68 N-loop LYS 33 B VdWContact
Phe 12 68 N-loop THR 8 B Hydrophobic
Phe 12 68 N-loop THR 8 B HBAcceptor
Phe 12 68 N-loop THR 8 B VdWContact
Ala 13 69 N-loop SER 5 B VdWContact
Ala 13 69 N-loop SER 4 B VdWContact
Tyr 14 70 N-loop SER 5 B VdWContact
Ile 15 71 N-loop SER 5 B VdWContact
Lys 33 94 30s-loop PHE 12 B Hydrophobic
Lys 33 94 30s-loop PHE 12 B CationPi
Lys 33 94 30s-loop PHE 12 B VdWContact
Gln 48 115 B3 ASP 6 B VdWContact
Gln 48 115 B3 THR 7 B Hydrophobic
Gln 48 115 B3 THR 7 B VdWContact
Val 49 116 B3 ASP 6 B VdWContact
Val 49 116 B3 SER 5 B VdWContact
Cys 50 117 B3 SER 5 B HBDonor
Cys 50 117 B3 SER 5 B VdWContact
Cys 50 117 B3 ASP 6 B VdWContact

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