Interactions for 2VXW — Binding Partner: CCL5
Structure details
- PDB ID: 2VXW open_in_new
- Protein: CCL5_HUMAN
- Organism: Homo sapiens
- UniProt ID: P13501 open_in_new
- Method: X-ray
- Resolution: 1.7 Å
- Date: July 29, 2008
- Reference: 10.1002/PROT.22542 open_in_new
- State: Oligomer
- Chemokine Chain: B
- Partner Chain: A,C,D
Chemokine diagram
Interactions for this Binding Partner
Download list as CSV
| Chemokine Residue | Generic Number | Segment | Partner Residue | Partner Chain | Interaction Type |
|---|---|---|---|---|---|
| Ala - | NTc.Cm10 | N-term | VAL 40 | D | Hydrophobic |
| Ala - | NTc.Cm10 | N-term | THR 30 | D | Hydrophobic |
| Ala - | NTc.Cm10 | N-term | CYS 10 | D | VdWContact |
| Ala - | NTc.Cm10 | N-term | GLN 48 | D | Hydrophobic |
| Ala - | NTc.Cm10 | N-term | GLN 48 | D | VdWContact |
| Ala - | NTc.Cm10 | N-term | CYS 50 | D | VdWContact |
| Ala - | NTc.Cm10 | N-term | ALA 9 | D | VdWContact |
| Ala - | NTc.Cm10 | N-term | PHE 28 | D | Hydrophobic |
| Ala - | NTc.Cm10 | N-term | CYS 11 | D | Hydrophobic |
| Ser 1 | NTc.Cm9 | N-term | VAL 49 | D | VdWContact |
| Ser 1 | NTc.Cm9 | N-term | GLN 48 | D | HBDonor |
| Ser 1 | NTc.Cm9 | N-term | GLN 48 | D | VdWContact |
| Ser 1 | NTc.Cm9 | N-term | CYS 50 | D | HBAcceptor |
| Ser 1 | NTc.Cm9 | N-term | CYS 50 | D | VdWContact |
| Pro 2 | NTc.Cm8 | N-term | ALA 13 | A | Hydrophobic |
| Pro 2 | NTc.Cm8 | N-term | ALA 13 | A | VdWContact |
| Ser 5 | NTc.Cm5 | N-term | CYS 50 | A | HBAcceptor |
| Ser 5 | NTc.Cm5 | N-term | CYS 50 | A | VdWContact |
| Ser 5 | NTc.Cm5 | N-term | ALA 13 | D | VdWContact |
| Asp 6 | NTc.Cm4 | N-term | GLN 48 | A | VdWContact |
| Thr 7 | NTc.Cm3 | N-term | GLN 48 | A | HBDonor |
| Thr 7 | NTc.Cm3 | N-term | GLN 48 | A | VdWContact |
| Thr 8 | NTc.Cm2 | N-term | CYS 10 | A | HBAcceptor |
| Thr 8 | NTc.Cm2 | N-term | CYS 10 | A | HBDonor |
| Thr 8 | NTc.Cm2 | N-term | CYS 10 | A | VdWContact |
| Cys 10 | CX.1 | CX | SER 8 | A | HBAcceptor |
| Cys 10 | CX.1 | CX | SER 8 | A | HBDonor |
| Cys 10 | CX.1 | CX | SER 8 | A | VdWContact |
| Cys 10 | CX.1 | CX | CYS 10 | A | Hydrophobic |
| Phe 12 | cxb1.1 | N-loop | LYS 33 | A | Hydrophobic |
| Phe 12 | cxb1.1 | N-loop | SER 8 | A | VdWContact |
| Phe 12 | cxb1.1 | N-loop | ALA 16 | C | HBAcceptor |
| Phe 12 | cxb1.1 | N-loop | ALA 16 | C | VdWContact |
| Ala 13 | cxb1.2 | N-loop | PRO 2 | A | Hydrophobic |
| Ala 13 | cxb1.2 | N-loop | ALA 13 | C | Hydrophobic |
| Ala 13 | cxb1.2 | N-loop | TYR 14 | C | VdWContact |
| Tyr 14 | cxb1.5 | N-loop | TYR 14 | C | HBAcceptor |
| Tyr 14 | cxb1.5 | N-loop | TYR 14 | C | HBDonor |
| Tyr 14 | cxb1.5 | N-loop | TYR 14 | C | VdWContact |
| Tyr 14 | cxb1.5 | N-loop | ALA 16 | C | Hydrophobic |
| Ala 16 | cxb1.7 | N-loop | PHE 12 | C | HBDonor |
| Ala 16 | cxb1.7 | N-loop | PHE 12 | C | VdWContact |
| Ala 16 | cxb1.7 | N-loop | ASN 36 | C | Hydrophobic |
| Ala 16 | cxb1.7 | N-loop | TYR 14 | C | Hydrophobic |
| Arg 17 | cxb1.8 | N-loop | ASN 36 | C | VdWContact |
| Arg 17 | cxb1.8 | N-loop | SER 35 | C | VdWContact |
| Lys 33 | b1b2.10 | 30s-loop | PHE 12 | A | Hydrophobic |
| Ser 35 | b1b2.13 | 30s-loop | ARG 17 | C | HBAcceptor |
| Ser 35 | b1b2.13 | 30s-loop | ARG 17 | C | VdWContact |
| Asn 36 | b1b2.14 | 30s-loop | ARG 17 | C | VdWContact |
| Asn 36 | b1b2.14 | 30s-loop | ALA 16 | C | Hydrophobic |
| Gln 48 | B3.1 | B3 | GLN 6 | A | VdWContact |
| Gln 48 | B3.1 | B3 | SER 7 | A | HBAcceptor |
| Gln 48 | B3.1 | B3 | SER 7 | A | VdWContact |
| Cys 50 | B3.3 | B3 | SER 5 | A | HBDonor |
| Cys 50 | B3.3 | B3 | SER 5 | A | VdWContact |
| Glu 54 | b3h.3 | 50s-loop | LYS 55 | C | Anionic |
| Lys 55 | b3h.4 | 50s-loop | GLU 54 | C | Cationic |
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