Interactions for 2VXW — Binding Partner: CCL5


Structure details

  • Chemokine Chain: C
  • Partner Chain: A,B,D
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Chemokine diagram

T S G K C S N P 30s-loop R K N R 40s-loop N P E K 50s-loopC-term Q S S A C C F A Y I A R P L P R A N-term Y F Y E K I H A V V F V T A C V Q K W V R E Y I N S L E M S

Interactions for this Binding Partner

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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Phe 12 cxb1.1 N-loop ALA 16 B HBAcceptor
Phe 12 cxb1.1 N-loop ALA 16 B VdWContact
Ala 13 cxb1.2 N-loop ALA 13 B Hydrophobic
Tyr 14 cxb1.5 N-loop ALA 16 B Hydrophobic
Tyr 14 cxb1.5 N-loop TYR 14 B HBAcceptor
Tyr 14 cxb1.5 N-loop TYR 14 B HBDonor
Tyr 14 cxb1.5 N-loop TYR 14 B VdWContact
Tyr 14 cxb1.5 N-loop ALA 13 B VdWContact
Ile 15 cxb1.6 N-loop PRO 2 A Hydrophobic
Ala 16 cxb1.7 N-loop PHE 12 B HBDonor
Ala 16 cxb1.7 N-loop PHE 12 B VdWContact
Ala 16 cxb1.7 N-loop TYR 14 B Hydrophobic
Ala 16 cxb1.7 N-loop ASN 36 B Hydrophobic
Arg 17 cxb1.8 N-loop SER 35 B HBDonor
Arg 17 cxb1.8 N-loop SER 35 B VdWContact
Arg 17 cxb1.8 N-loop ASN 36 B VdWContact
Phe 28 B1.6 B1 PHE 0 A Hydrophobic
Thr 30 b1b2.4 30s-loop PHE 0 A Hydrophobic
Ser 35 b1b2.13 30s-loop ARG 17 B VdWContact
Asn 36 b1b2.14 30s-loop ARG 17 B VdWContact
Asn 36 b1b2.14 30s-loop ALA 16 B Hydrophobic
Val 40 B2.3 B2 PHE 0 A Hydrophobic
Arg 47 b2b3.12 40s-loop SER 1 A HBDonor
Arg 47 b2b3.12 40s-loop SER 1 A VdWContact
Gln 48 B3.1 B3 PHE 0 A Hydrophobic
Gln 48 B3.1 B3 PHE 0 A VdWContact
Gln 48 B3.1 B3 SER 1 A HBAcceptor
Gln 48 B3.1 B3 SER 1 A VdWContact
Val 49 B3.2 B3 SER 1 A VdWContact
Cys 50 B3.3 B3 PHE 0 A VdWContact
Cys 50 B3.3 B3 SER 1 A HBDonor
Cys 50 B3.3 B3 SER 1 A VdWContact
Glu 54 b3h.3 50s-loop LYS 55 B Anionic
Lys 55 b3h.4 50s-loop GLU 54 B Cationic

Interaction pattern search
(0.00 = no similarity, 1.00 = identical)