Interactions for 2VXW — Binding Partner: CCL5


Structure details

  • Chemokine Chain: D
  • Partner Chain: A,B,C
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Chemokine diagram

T S G K C S N P 30s-loop R K N R 40s-loop N P E K 50s-loopC-term S S A C C F A Y I A R P L P R A N-term Y F Y E K I H A V V F V T A C V Q K W V R E Y I N S L E M S

Interactions for this Binding Partner

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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Pro 9 NTc.Cm1 N-term PHE 0 B VdWContact
Cys 10 CX.1 CX PHE 0 B VdWContact
Cys 11 CX.5 CX PHE 0 B Hydrophobic
Phe 12 cxb1.1 N-loop ALA 16 A HBAcceptor
Phe 12 cxb1.1 N-loop ALA 16 A VdWContact
Ala 13 cxb1.2 N-loop TYR 14 A VdWContact
Ala 13 cxb1.2 N-loop SER 5 B VdWContact
Ala 13 cxb1.2 N-loop ALA 13 A Hydrophobic
Tyr 14 cxb1.5 N-loop TYR 14 A HBAcceptor
Tyr 14 cxb1.5 N-loop TYR 14 A HBDonor
Tyr 14 cxb1.5 N-loop TYR 14 A VdWContact
Tyr 14 cxb1.5 N-loop ALA 13 A VdWContact
Tyr 14 cxb1.5 N-loop ALA 16 A Hydrophobic
Ala 16 cxb1.7 N-loop TYR 14 A Hydrophobic
Ala 16 cxb1.7 N-loop ASN 36 A Hydrophobic
Ala 16 cxb1.7 N-loop PHE 12 A HBDonor
Ala 16 cxb1.7 N-loop PHE 12 A VdWContact
Arg 17 cxb1.8 N-loop ASN 36 A VdWContact
Phe 28 B1.6 B1 PHE 0 B Hydrophobic
Thr 30 b1b2.4 30s-loop PHE 0 B Hydrophobic
Asn 36 b1b2.14 30s-loop ARG 17 A VdWContact
Asn 36 b1b2.14 30s-loop ALA 16 A Hydrophobic
Val 40 B2.3 B2 PHE 0 B Hydrophobic
Gln 48 B3.1 B3 PHE 0 B Hydrophobic
Gln 48 B3.1 B3 PHE 0 B VdWContact
Gln 48 B3.1 B3 SER 1 B HBAcceptor
Gln 48 B3.1 B3 SER 1 B VdWContact
Val 49 B3.2 B3 SER 1 B VdWContact
Cys 50 B3.3 B3 SER 1 B HBDonor
Cys 50 B3.3 B3 SER 1 B VdWContact
Cys 50 B3.3 B3 PHE 0 B VdWContact
Glu 54 b3h.3 50s-loop LYS 55 A Anionic

Interaction pattern search
(0.00 = no similarity, 1.00 = identical)