Interactions for 8IC0 — Binding Partner: CXCR1
Structure details
- PDB ID: 8IC0 open_in_new
- Protein: CXCL8_HUMAN
- Organism: Homo sapiens
- UniProt ID: P10145 open_in_new
- Method: Cryo-em
- Resolution: 3.41 Å
- Date: July 19, 2023
- Reference: 10.1038/S41467-023-39799-2 open_in_new
- State: Monomer
- Chemokine Chain: F
- Partner Chain: A
Chemokine diagram
Pick color:
Interactions for this Binding Partner
Download list in excel
Chemokine Residue | Generic Number | Segment | Partner Residue | Partner Chain | Interaction Type |
---|---|---|---|---|---|
Ser 1 | 57 | N-term | SER 184 | A | VdWContact |
Ala 2 | 58 | N-term | VAL 186 | A | VdWContact |
Lys 3 | 59 | N-term | GLU 291 | A | Cationic |
Glu 4 | 60 | N-term | ARG 199 | A | Anionic |
Glu 4 | 60 | N-term | LEU 287 | A | Hydrophobic |
Glu 4 | 60 | N-term | ARG 269 | A | HBAcceptor |
Glu 4 | 60 | N-term | ARG 269 | A | Anionic |
Glu 4 | 60 | N-term | ARG 269 | A | VdWContact |
Glu 4 | 60 | N-term | ARG 203 | A | HBAcceptor |
Glu 4 | 60 | N-term | ARG 203 | A | Anionic |
Leu 5 | 61 | N-term | TYR 188 | A | Hydrophobic |
Arg 6 | 62 | N-term | ASP 265 | A | HBDonor |
Arg 6 | 62 | N-term | ASP 265 | A | Cationic |
Arg 6 | 62 | N-term | ASP 265 | A | VdWContact |
Arg 6 | 62 | N-term | ARG 269 | A | VdWContact |
Arg 6 | 62 | N-term | ARG 280 | A | VdWContact |
Gln 8 | 66 | CX | PRO 29 | A | Hydrophobic |
Gln 8 | 66 | CX | PRO 29 | A | VdWContact |
Cys 9 | 67 | CX | PRO 29 | A | Hydrophobic |
Ile 10 | 68 | N-loop | GLU 275 | A | Hydrophobic |
Lys 11 | 69 | N-loop | ASP 26 | A | HBDonor |
Lys 11 | 69 | N-loop | ASP 26 | A | Cationic |
Lys 11 | 69 | N-loop | ASP 26 | A | VdWContact |
Lys 11 | 69 | N-loop | TYR 27 | A | VdWContact |
Tyr 13 | 71 | N-loop | PRO 22 | A | Hydrophobic |
Tyr 13 | 71 | N-loop | PRO 22 | A | VdWContact |
Lys 15 | 73 | N-loop | PRO 21 | A | Cationic |
Lys 15 | 73 | N-loop | PRO 21 | A | VdWContact |
Lys 15 | 73 | N-loop | PRO 22 | A | VdWContact |
Pro 32 | 93 | 30s-loop | THR 195 | A | Hydrophobic |
Pro 32 | 93 | 30s-loop | THR 195 | A | HBAcceptor |
Pro 32 | 93 | 30s-loop | THR 195 | A | VdWContact |
Pro 32 | 93 | 30s-loop | TYR 178 | A | Hydrophobic |
Pro 32 | 93 | 30s-loop | TYR 178 | A | VdWContact |
Ile 40 | 102 | B2 | PRO 29 | A | Hydrophobic |
Arg 47 | 114 | 40s-loop | PRO 22 | A | VdWContact |
Arg 47 | 114 | 40s-loop | ALA 23 | A | VdWContact |
Glu 48 | 115 | B3 | SER 28 | A | HBAcceptor |
Glu 48 | 115 | B3 | SER 28 | A | VdWContact |
Glu 48 | 115 | B3 | TYR 27 | A | VdWContact |
Leu 49 | 116 | B3 | TYR 27 | A | Hydrophobic |
Leu 49 | 116 | B3 | TYR 27 | A | VdWContact |