Interactions for 8K3Z — Binding Partner: CXCR4


Structure details

  • Chemokine Chain: D
  • Partner Chain: A
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Chemokine diagram

N T P N C A L Q 30s-loop K N N N R 40s-loop D P K L 50s-loopC-term K P V S L S Y R C P C R F F E S H V A R A N N-term L I K L H K V I V A R L I C V Q K W I Q E Y L
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Interactions for this Binding Partner

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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Lys 1 55 N-term HIS 113 A Hydrophobic
Lys 1 55 N-term CYS 186 A HBDonor
Lys 1 55 N-term CYS 186 A VdWContact
Lys 1 55 N-term ASP 187 A Cationic
Lys 1 55 N-term ASP 97 A Cationic
Lys 1 55 N-term TRP 94 A Hydrophobic
Lys 1 55 N-term TRP 94 A VdWContact
Pro 2 56 N-term TYR 116 A Hydrophobic
Pro 2 56 N-term PHE 292 A Hydrophobic
Pro 2 56 N-term TRP 94 A Hydrophobic
Pro 2 56 N-term GLU 288 A VdWContact
Val 3 57 N-term ILE 259 A Hydrophobic
Val 3 57 N-term ILE 259 A VdWContact
Val 3 57 N-term TYR 255 A Hydrophobic
Val 3 57 N-term ILE 284 A Hydrophobic
Val 3 57 N-term GLU 288 A HBDonor
Val 3 57 N-term GLU 288 A VdWContact
Ser 4 58 N-term HIS 281 A HBAcceptor
Ser 4 58 N-term HIS 281 A VdWContact
Ser 4 58 N-term GLU 288 A HBDonor
Ser 4 58 N-term GLU 288 A VdWContact
Leu 5 59 N-term LEU 41 A Hydrophobic
Leu 5 59 N-term ALA 98 A Hydrophobic
Leu 5 59 N-term ALA 98 A VdWContact
Leu 5 59 N-term TRP 94 A Hydrophobic
Tyr 7 61 N-term ASP 187 A HBDonor
Tyr 7 61 N-term ASP 187 A VdWContact
Arg 8 62 N-term ASP 262 A HBDonor
Arg 8 62 N-term ASP 262 A Cationic
Arg 8 62 N-term ASP 262 A VdWContact
Arg 8 62 N-term ARG 30 A VdWContact
Pro 10 66 CX CYS 28 A HBAcceptor
Pro 10 66 CX CYS 28 A VdWContact
Pro 10 66 CX PRO 27 A Hydrophobic
Pro 10 66 CX PRO 27 A VdWContact
Pro 10 66 CX PHE 29 A Hydrophobic
Phe 13 69 N-loop GLU 268 A Hydrophobic
Phe 13 69 N-loop GLU 268 A VdWContact
Phe 13 69 N-loop LYS 25 A VdWContact
Glu 15 71 N-loop LYS 25 A VdWContact
Leu 29 89 B1 PHE 29 A Hydrophobic
Leu 29 89 B1 PHE 29 A VdWContact
Pro 32 92 30s-loop PHE 189 A Hydrophobic
Pro 32 92 30s-loop SER 178 A HBAcceptor
Pro 32 92 30s-loop SER 178 A VdWContact
Pro 32 92 30s-loop ILE 185 A Hydrophobic
Asn 33 94 30s-loop PHE 189 A Hydrophobic
Asn 33 94 30s-loop PHE 189 A VdWContact
Val 39 102 B2 PHE 29 A Hydrophobic
Val 39 102 B2 PRO 27 A Hydrophobic
Val 39 102 B2 PRO 27 A VdWContact
Arg 47 114 40s-loop GLU 26 A Hydrophobic
Gln 48 115 B3 PRO 27 A Hydrophobic
Gln 48 115 B3 PRO 27 A VdWContact
Val 49 116 B3 LYS 25 A VdWContact

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