Interactions for 1F9Q — Binding Partner: CXCL4


Structure details

  • Chemokine Chain: A
  • Partner Chain: B,C,D
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Chemokine diagram

I K A G P H C P T A 30s-loop K N G R 40s-loop D L Q A 50s-loopC-term D L Q C L C V K T T S Q V R P R N-term V E L S T I H Q L I A T L L C I K P L Y K K I I K K L L E S

Interactions for this Binding Partner

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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Asp 7 NTc.Cm3 N-term CYS 352 D HBAcceptor
Asp 7 NTc.Cm3 N-term CYS 352 D VdWContact
Asp 7 NTc.Cm3 N-term THR 316 D VdWContact
Asp 7 NTc.Cm3 N-term ILE 351 D Hydrophobic
Asp 7 NTc.Cm3 N-term ILE 351 D VdWContact
Asp 7 NTc.Cm3 N-term VAL 313 D HBAcceptor
Asp 7 NTc.Cm3 N-term VAL 313 D VdWContact
Asp 7 NTc.Cm3 N-term LYS 314 D VdWContact
Leu 8 NTc.Cm2 N-term LEU 311 D Hydrophobic
Leu 8 NTc.Cm2 N-term LEU 311 D VdWContact
Leu 8 NTc.Cm2 N-term ILE 342 D Hydrophobic
Leu 8 NTc.Cm2 N-term LYS 350 D Hydrophobic
Gln 9 NTc.Cm1 N-term LEU 311 D HBDonor
Gln 9 NTc.Cm1 N-term LEU 311 D VdWContact
Gln 9 NTc.Cm1 N-term VAL 313 D Hydrophobic
Gln 9 NTc.Cm1 N-term CYS 310 D HBDonor
Gln 9 NTc.Cm1 N-term CYS 310 D VdWContact
Cys 10 CX.1 CX GLN 309 D HBAcceptor
Cys 10 CX.1 CX GLN 309 D VdWContact
Leu 11 CX.4 CX GLN 309 D HBAcceptor
Leu 11 CX.4 CX GLN 309 D VdWContact
Leu 11 CX.4 CX LEU 311 D Hydrophobic
Leu 11 CX.4 CX LEU 311 D VdWContact
Leu 11 CX.4 CX LEU 308 D VdWContact
Cys 12 CX.5 CX ASP 307 D VdWContact
Val 13 cxb1.1 N-loop GLN 309 D Hydrophobic
Val 13 cxb1.1 N-loop GLN 309 D VdWContact
Val 13 cxb1.1 N-loop ASP 307 D HBDonor
Val 13 cxb1.1 N-loop ASP 307 D VdWContact
Lys 14 cxb1.2 N-loop ASP 307 D HBDonor
Lys 14 cxb1.2 N-loop ASP 307 D Cationic
Lys 14 cxb1.2 N-loop ASP 307 D VdWContact
Lys 14 cxb1.2 N-loop ASP 305 D HBDonor
Lys 14 cxb1.2 N-loop ASP 305 D VdWContact
Lys 14 cxb1.2 N-loop GLY 306 D HBDonor
Lys 14 cxb1.2 N-loop GLY 306 D VdWContact
Thr 16 cxb1.6 N-loop ASP 307 D VdWContact
Thr 25 B1.3 B1 ASN 247 C HBDonor
Thr 25 B1.3 B1 ASN 247 C VdWContact
Thr 25 B1.3 B1 LYS 131 B HBAcceptor
Thr 25 B1.3 B1 LYS 131 B VdWContact
Ser 26 B1.4 B1 VAL 129 B VdWContact
Ser 26 B1.4 B1 GLU 128 B HBDonor
Ser 26 B1.4 B1 GLU 128 B VdWContact
Leu 27 B1.5 B1 VAL 129 B HBAcceptor
Leu 27 B1.5 B1 VAL 129 B HBDonor
Leu 27 B1.5 B1 VAL 129 B VdWContact
Leu 27 B1.5 B1 GLU 128 B VdWContact
Val 29 B1.7 B1 LEU 127 B Hydrophobic
Val 29 B1.7 B1 LEU 127 B HBAcceptor
Val 29 B1.7 B1 LEU 127 B HBDonor
Val 29 B1.7 B1 LEU 127 B VdWContact
Val 29 B1.7 B1 LEU 167 B Hydrophobic
Val 29 B1.7 B1 LEU 168 B Hydrophobic
Val 29 B1.7 B1 LEU 168 B VdWContact
Val 29 B1.7 B1 SER 126 B VdWContact
Lys 31 b1b2.6 30s-loop SER 170 B Cationic
Lys 31 b1b2.6 30s-loop SER 170 B VdWContact
Lys 31 b1b2.6 30s-loop THR 125 B HBDonor
Lys 31 b1b2.6 30s-loop THR 125 B VdWContact
Lys 31 b1b2.6 30s-loop LEU 167 B Hydrophobic
Lys 31 b1b2.6 30s-loop LEU 167 B VdWContact
Ala 32 b1b2.7 30s-loop SER 170 B VdWContact
Ala 39 b1b2.16 30s-loop LEU 168 B Hydrophobic
Leu 41 B2.2 B2 LEU 168 B Hydrophobic
Ile 42 B2.3 B2 LEU 308 D Hydrophobic
Gly 48 b2b3.11 40s-loop LYS 246 C VdWContact
Lys 50 B3.1 B3 LEU 308 D Hydrophobic
Ile 51 B3.2 B3 ASP 307 D VdWContact
Cys 52 B3.3 B3 ASP 307 D Hydrophobic
Cys 52 B3.3 B3 ASP 307 D HBDonor
Cys 52 B3.3 B3 ASP 307 D VdWContact
Leu 55 b3h.2 50s-loop LEU 168 B Hydrophobic
Tyr 60 H.3 Helix LEU 168 B Hydrophobic
Tyr 60 H.3 Helix LEU 168 B VdWContact
Ile 64 H.7 Helix ILE 164 B Hydrophobic
Ile 64 H.7 Helix ILE 164 B VdWContact
Leu 67 H.10 Helix VAL 129 B Hydrophobic
Leu 67 H.10 Helix VAL 129 B VdWContact
Leu 67 H.10 Helix LYS 131 B Hydrophobic
Leu 67 H.10 Helix LYS 131 B VdWContact
Leu 68 CT.1 C-term LEU 141 B Hydrophobic
Leu 68 CT.1 C-term LEU 141 B VdWContact
Leu 68 CT.1 C-term VAL 129 B Hydrophobic
Leu 68 CT.1 C-term ALA 139 B Hydrophobic
Leu 68 CT.1 C-term TYR 160 B Hydrophobic
Leu 68 CT.1 C-term TYR 160 B VdWContact

Interaction pattern search
(0.00 = no similarity, 1.00 = identical)