Interactions for 4LMQ — Binding Partner: hu30D8 Fab


Structure details

  • Chemokine Chain: D
  • Partner Chain: H,L
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Chemokine diagram

L N T P L 30s-loop K N N N R 40s-loop D P K L 50s-loopC-term I K L H K V N Q I V A R L I C V Q K W I Q E Y L E K A L N K

Interactions for this Binding Partner

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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Glu 15 cxb1.6 N-loop ASN 99 H Hydrophobic
Glu 15 cxb1.6 N-loop ASN 99 H HBAcceptor
Glu 15 cxb1.6 N-loop ASN 99 H VdWContact
Ser 16 cxb1.8 N-loop TYR 100 H VdWContact
His 17 cxb1.10 N-loop TYR 100 H Hydrophobic
His 17 cxb1.10 N-loop TYR 100 H VdWContact
His 17 cxb1.10 N-loop TYR 31 L Hydrophobic
His 17 cxb1.10 N-loop TYR 31 L PiStacking
His 17 cxb1.10 N-loop TYR 31 L VdWContact
His 17 cxb1.10 N-loop ASN 50 L HBAcceptor
His 17 cxb1.10 N-loop ASN 50 L VdWContact
Val 18 cxb1.11 N-loop ASN 99 H Hydrophobic
Ala 19 cxb1.14 N-loop TYR 100 H HBDonor
Ala 19 cxb1.14 N-loop TYR 100 H VdWContact
Ala 19 cxb1.14 N-loop SER 32 L VdWContact
Ala 19 cxb1.14 N-loop TRP 92 L Hydrophobic
Ala 19 cxb1.14 N-loop TRP 92 L VdWContact
Ala 19 cxb1.14 N-loop TYR 91 L Hydrophobic
Ala 19 cxb1.14 N-loop TYR 91 L VdWContact
Arg 20 cxb1.15 N-loop TRP 92 L Hydrophobic
Arg 20 cxb1.15 N-loop TRP 92 L VdWContact
Arg 20 cxb1.15 N-loop ASN 93 L VdWContact
Ala 21 cxb1.16 N-loop PHE 96 L Hydrophobic
Ala 21 cxb1.16 N-loop THR 94 L Hydrophobic
Ala 21 cxb1.16 N-loop THR 94 L VdWContact
Ala 21 cxb1.16 N-loop TRP 92 L HBDonor
Ala 21 cxb1.16 N-loop TRP 92 L VdWContact
Ala 21 cxb1.16 N-loop ASN 93 L VdWContact
Asn 22 B1.1 B1 ASN 99 H HBDonor
Asn 22 B1.1 B1 ASN 99 H VdWContact
Asn 22 B1.1 B1 GLY 100 H VdWContact
Leu 42 B2.6 B2 ASN 99 H Hydrophobic
Lys 43 b2b3.2 40s-loop TRP 52 H Hydrophobic
Lys 43 b2b3.2 40s-loop TRP 52 H VdWContact
Lys 43 b2b3.2 40s-loop GLU 58 H Cationic
Lys 43 b2b3.2 40s-loop GLU 58 H VdWContact
Asn 44 b2b3.3 40s-loop LEU 98 H HBDonor
Asn 44 b2b3.3 40s-loop LEU 98 H VdWContact
Asn 44 b2b3.3 40s-loop TRP 52 H Hydrophobic
Asn 44 b2b3.3 40s-loop TRP 52 H VdWContact
Asn 44 b2b3.3 40s-loop ASP 95 H HBDonor
Asn 44 b2b3.3 40s-loop ASP 95 H VdWContact
Asn 44 b2b3.3 40s-loop SER 33 H HBAcceptor
Asn 44 b2b3.3 40s-loop SER 33 H VdWContact
Asn 44 b2b3.3 40s-loop GLY 97 H VdWContact
Asn 45 b2b3.4 40s-loop ASN 99 H HBDonor
Asn 45 b2b3.4 40s-loop ASN 99 H VdWContact
Asn 45 b2b3.4 40s-loop GLY 97 H HBDonor
Asn 45 b2b3.4 40s-loop GLY 97 H VdWContact
Asn 46 b2b3.11 40s-loop SER 54 H HBAcceptor
Asn 46 b2b3.11 40s-loop SER 54 H VdWContact
Arg 47 b2b3.12 40s-loop ASN 99 H HBDonor
Arg 47 b2b3.12 40s-loop ASN 99 H VdWContact
Trp 57 H.2 Helix TRP 92 L Hydrophobic
Trp 57 H.2 Helix TRP 92 L VdWContact

Interaction pattern search
(0.00 = no similarity, 1.00 = identical)