Interactions for 1F9Q — Binding Partner: CXCL4


Structure details

  • Chemokine Chain: B
  • Partner Chain: A,C,D
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Chemokine diagram

I K A G P H C P T A 30s-loop K N G R 40s-loop D L Q A 50s-loopC-term Q C L C V K T T S Q V R P R N-term V E L S T I H Q L I A T L L C I K P L Y K K I I K K L L E S

Interactions for this Binding Partner

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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Gln 109 NTc.Cm1 N-term THR 216 C VdWContact
Leu 111 CX.4 CX LEU 211 C Hydrophobic
Leu 111 CX.4 CX LEU 211 C VdWContact
Leu 111 CX.4 CX CYS 252 C Hydrophobic
Leu 111 CX.4 CX CYS 252 C VdWContact
Leu 111 CX.4 CX LYS 250 C Hydrophobic
Val 113 cxb1.1 N-loop LYS 214 C Hydrophobic
Val 113 cxb1.1 N-loop VAL 213 C Hydrophobic
Val 113 cxb1.1 N-loop VAL 213 C VdWContact
Thr 125 B1.3 B1 LYS 31 A HBAcceptor
Thr 125 B1.3 B1 LYS 31 A VdWContact
Ser 126 B1.4 B1 VAL 29 A VdWContact
Leu 127 B1.5 B1 VAL 29 A Hydrophobic
Leu 127 B1.5 B1 VAL 29 A HBAcceptor
Leu 127 B1.5 B1 VAL 29 A HBDonor
Leu 127 B1.5 B1 VAL 29 A VdWContact
Glu 128 B1.6 B1 LEU 27 A VdWContact
Glu 128 B1.6 B1 SER 26 A HBAcceptor
Glu 128 B1.6 B1 SER 26 A VdWContact
Glu 128 B1.6 B1 LYS 250 C Anionic
Glu 128 B1.6 B1 LYS 250 C VdWContact
Val 129 B1.7 B1 LEU 27 A HBAcceptor
Val 129 B1.7 B1 LEU 27 A HBDonor
Val 129 B1.7 B1 LEU 27 A VdWContact
Val 129 B1.7 B1 SER 26 A VdWContact
Val 129 B1.7 B1 LEU 67 A Hydrophobic
Val 129 B1.7 B1 LEU 67 A VdWContact
Val 129 B1.7 B1 LEU 68 A Hydrophobic
Ile 130 b1b2.4 30s-loop LYS 250 C Hydrophobic
Lys 131 b1b2.6 30s-loop LEU 67 A Hydrophobic
Lys 131 b1b2.6 30s-loop LEU 67 A VdWContact
Lys 131 b1b2.6 30s-loop THR 25 A HBDonor
Lys 131 b1b2.6 30s-loop THR 25 A VdWContact
His 135 b1b2.10 30s-loop ARG 249 C PiCation
Ala 139 b1b2.16 30s-loop LEU 68 A Hydrophobic
Leu 141 B2.2 B2 LEU 68 A Hydrophobic
Leu 141 B2.2 B2 LEU 68 A VdWContact
Ile 142 B2.3 B2 LEU 211 C Hydrophobic
Lys 146 b2b3.2 40s-loop ASN 347 D VdWContact
Lys 146 b2b3.2 40s-loop GLY 348 D VdWContact
Asn 147 b2b3.4 40s-loop THR 325 D HBAcceptor
Asn 147 b2b3.4 40s-loop THR 325 D VdWContact
Arg 149 b2b3.12 40s-loop GLN 209 C VdWContact
Arg 149 b2b3.12 40s-loop HIS 235 C CationPi
Arg 149 b2b3.12 40s-loop HIS 235 C VdWContact
Lys 150 B3.1 B3 LEU 211 C Hydrophobic
Lys 150 B3.1 B3 LEU 211 C VdWContact
Lys 150 B3.1 B3 GLU 228 C HBDonor
Lys 150 B3.1 B3 GLU 228 C Cationic
Lys 150 B3.1 B3 GLU 228 C VdWContact
Lys 150 B3.1 B3 ILE 230 C Hydrophobic
Lys 150 B3.1 B3 ILE 242 C Hydrophobic
Tyr 160 H.3 Helix LEU 68 A Hydrophobic
Tyr 160 H.3 Helix LEU 68 A VdWContact
Ile 164 H.7 Helix ILE 64 A Hydrophobic
Ile 164 H.7 Helix ILE 64 A VdWContact
Leu 167 H.10 Helix VAL 29 A Hydrophobic
Leu 167 H.10 Helix LYS 31 A Hydrophobic
Leu 167 H.10 Helix LYS 31 A VdWContact
Leu 168 CT.1 C-term LEU 55 A Hydrophobic
Leu 168 CT.1 C-term ALA 39 A Hydrophobic
Leu 168 CT.1 C-term LEU 41 A Hydrophobic
Leu 168 CT.1 C-term VAL 29 A Hydrophobic
Leu 168 CT.1 C-term VAL 29 A VdWContact
Leu 168 CT.1 C-term TYR 60 A Hydrophobic
Leu 168 CT.1 C-term TYR 60 A VdWContact
Ser 170 CT.3 C-term ALA 32 A VdWContact
Ser 170 CT.3 C-term LYS 31 A Anionic
Ser 170 CT.3 C-term LYS 31 A VdWContact

Interaction pattern search
(0.00 = no similarity, 1.00 = identical)