Interactions for 8XX6 — Binding Partner: CXCL8
Structure details
- PDB ID: 8XX6 open_in_new
- Protein: CXCL8_HUMAN
- Organism: Homo sapiens
- UniProt ID: P10145 open_in_new
- Method: Cryo-em
- Resolution: 2.99 Å
- Date: Jan. 15, 2025
- Reference: open_in_new
- State: Dimer
- Chemokine Chain: E
- Partner Chain: D
Chemokine diagram
Pick color:
Interactions for this Binding Partner
Download list in excel
Chemokine Residue | Generic Number | Segment | Partner Residue | Partner Chain | Interaction Type |
---|---|---|---|---|---|
Lys 21 | 84 | B1 | GLU 29 | D | HBAcceptor |
Lys 21 | 84 | B1 | GLU 29 | D | Cationic |
Lys 21 | 84 | B1 | GLU 29 | D | VdWContact |
Glu 22 | 85 | B1 | ARG 26 | D | Anionic |
Glu 22 | 85 | B1 | ILE 28 | D | Hydrophobic |
Glu 22 | 85 | B1 | ILE 28 | D | VdWContact |
Glu 22 | 85 | B1 | VAL 27 | D | VdWContact |
Leu 23 | 86 | B1 | ARG 26 | D | VdWContact |
Leu 23 | 86 | B1 | VAL 27 | D | HBAcceptor |
Leu 23 | 86 | B1 | VAL 27 | D | HBDonor |
Leu 23 | 86 | B1 | VAL 27 | D | VdWContact |
Arg 24 | 87 | B1 | GLU 24 | D | HBDonor |
Arg 24 | 87 | B1 | GLU 24 | D | Cationic |
Arg 24 | 87 | B1 | GLU 24 | D | VdWContact |
Arg 24 | 87 | B1 | LEU 25 | D | VdWContact |
Val 25 | 88 | B1 | LEU 66 | D | Hydrophobic |
Val 25 | 88 | B1 | PHE 65 | D | Hydrophobic |
Val 25 | 88 | B1 | GLU 24 | D | VdWContact |
Val 25 | 88 | B1 | LEU 25 | D | HBAcceptor |
Val 25 | 88 | B1 | LEU 25 | D | HBDonor |
Val 25 | 88 | B1 | LEU 25 | D | VdWContact |
Ile 26 | 89 | B1 | GLU 24 | D | Hydrophobic |
Ile 26 | 89 | B1 | GLU 24 | D | VdWContact |
Glu 27 | 90 | 30s-loop | LYS 23 | D | HBDonor |
Glu 27 | 90 | 30s-loop | LYS 23 | D | Anionic |
Glu 27 | 90 | 30s-loop | LYS 23 | D | VdWContact |
Glu 27 | 90 | 30s-loop | ALA 69 | D | Hydrophobic |
Glu 27 | 90 | 30s-loop | PHE 65 | D | Hydrophobic |
Glu 27 | 90 | 30s-loop | ARG 68 | D | HBAcceptor |
Glu 27 | 90 | 30s-loop | ARG 68 | D | Anionic |
Glu 27 | 90 | 30s-loop | ARG 68 | D | VdWContact |
Gln 57 | 126 | Helix | GLU 70 | D | VdWContact |
Phe 63 | 132 | Helix | GLU 29 | D | Hydrophobic |
Phe 63 | 132 | Helix | VAL 27 | D | Hydrophobic |
Leu 64 | 133 | Helix | LEU 66 | D | Hydrophobic |
Leu 64 | 133 | Helix | LEU 66 | D | VdWContact |
Leu 64 | 133 | Helix | VAL 62 | D | Hydrophobic |
Leu 64 | 133 | Helix | VAL 27 | D | Hydrophobic |
Arg 66 | 135 | Helix | GLU 29 | D | HBDonor |
Arg 66 | 135 | Helix | GLU 29 | D | Cationic |
Arg 66 | 135 | Helix | GLU 29 | D | VdWContact |
Ala 67 | 136 | C-term | THR 37 | D | Hydrophobic |
Ala 67 | 136 | C-term | THR 37 | D | HBAcceptor |
Ala 67 | 136 | C-term | THR 37 | D | VdWContact |
Ala 67 | 136 | C-term | VAL 27 | D | Hydrophobic |
Glu 68 | 137 | C-term | LYS 54 | D | HBAcceptor |
Glu 68 | 137 | C-term | LYS 54 | D | VdWContact |