Interactions
5CBA | CXCL13_HUMAN — 3b4
Residue contacts: 41
SUMMARY
- Protein
- CXCL13_HUMAN View protein entry
- Organism
- Homo sapiens
- UniProt ID
- O43927 View on UniProt
- PDB ID
- 5CBA View on PDB
- Method
- X-ray
- Resolution
- 2.5 Å
- Date
- Nov. 4, 2015
- Reference
- 10.1074/JBC.M115.688010 Open DOI
- State
- Monomer
Chain information
- Chemokine chain
- E
- Partner chain
- A,B
3D VIEW
INTERACTION TABLE
Download CSV| Chemokine Residue | Generic Number | Segment | Partner Residue | Partner Chain | Interaction Type |
|---|---|---|---|---|---|
| Phe 18 | cxb1.10 | N-loop | PHE 54 | A | Hydrophobic |
| Arg 21 | cxb1.15 | N-loop | GLU 95 | A | Cationic |
| Arg 21 | cxb1.15 | N-loop | ASP 97 | A | HBDonor |
| Arg 21 | cxb1.15 | N-loop | ASP 97 | A | Cationic |
| Arg 21 | cxb1.15 | N-loop | EDO 201 | A | VdWContact |
| Arg 21 | cxb1.15 | N-loop | PRO 96 | A | VdWContact |
| Arg 21 | cxb1.15 | N-loop | ASP 100 | A | Cationic |
| Arg 21 | cxb1.15 | N-loop | PRO 100 | A | Hydrophobic |
| Arg 21 | cxb1.15 | N-loop | ILE 100 | A | VdWContact |
| Arg 21 | cxb1.15 | N-loop | ILE 52 | A | Hydrophobic |
| Arg 22 | cxb1.16 | N-loop | EDO 201 | A | VdWContact |
| Arg 22 | cxb1.16 | N-loop | TYR 91 | B | Hydrophobic |
| Arg 22 | cxb1.16 | N-loop | ASP 95 | B | Cationic |
| Ile 24 | B1.2 | B1 | PRO 100 | A | Hydrophobic |
| Asp 25 | B1.3 | B1 | TYR 30 | B | HBAcceptor |
| Asp 25 | B1.3 | B1 | TYR 30 | B | VdWContact |
| Arg 26 | B1.4 | B1 | SER 100 | A | VdWContact |
| Arg 26 | B1.4 | B1 | TYR 100 | A | Hydrophobic |
| Arg 26 | B1.4 | B1 | TYR 100 | A | VdWContact |
| Ile 27 | B1.5 | B1 | TYR 100 | A | Hydrophobic |
| Ile 27 | B1.5 | B1 | TYR 100 | A | HBAcceptor |
| Ile 27 | B1.5 | B1 | TYR 100 | A | HBDonor |
| Ile 27 | B1.5 | B1 | TYR 100 | A | VdWContact |
| Gln 28 | B1.6 | B1 | SER 100 | A | HBDonor |
| Gln 28 | B1.6 | B1 | SER 100 | A | VdWContact |
| Lys 46 | b2b3.2 | 40s-loop | TRP 32 | B | Hydrophobic |
| Lys 46 | b2b3.2 | 40s-loop | ASP 100 | A | Cationic |
| Lys 46 | b2b3.2 | 40s-loop | TYR 30 | B | Hydrophobic |
| Lys 46 | b2b3.2 | 40s-loop | TYR 30 | B | VdWContact |
| Lys 48 | b2b3.11 | 40s-loop | TYR 30 | B | HBDonor |
| Lys 48 | b2b3.11 | 40s-loop | TYR 30 | B | VdWContact |
| Trp 59 | H.2 | Helix | PHE 54 | A | Hydrophobic |
| Trp 59 | H.2 | Helix | PHE 54 | A | VdWContact |
| Arg 62 | H.5 | Helix | ILE 53 | A | Hydrophobic |
| Arg 62 | H.5 | Helix | ILE 53 | A | VdWContact |
| Met 63 | H.6 | Helix | PHE 54 | A | Hydrophobic |
| Met 63 | H.6 | Helix | PHE 54 | A | VdWContact |
| Met 63 | H.6 | Helix | TYR 100 | A | Hydrophobic |
| Met 63 | H.6 | Helix | SER 31 | A | VdWContact |
| Val 66 | H.9 | Helix | SER 30 | A | VdWContact |
| Val 66 | H.9 | Helix | ILE 53 | A | Hydrophobic |