Interactions
5CBE | CXCL13_HUMAN — CXCL13
Residue contacts: 40
SUMMARY
- Protein
- CXCL13_HUMAN View protein entry
- Organism
- Homo sapiens
- UniProt ID
- O43927 View on UniProt
- PDB ID
- 5CBE View on PDB
- Method
- X-ray
- Resolution
- 2.4 Å
- Date
- Nov. 4, 2015
- Reference
- 10.1074/JBC.M115.688010 Open DOI
- State
- Dimer
Chain information
- Chemokine chain
- E
- Partner chain
- F
3D VIEW
INTERACTION TABLE
Download CSV| Chemokine Residue | Generic Number | Segment | Partner Residue | Partner Chain | Interaction Type |
|---|---|---|---|---|---|
| Tyr 3 | NTc.Cm6 | N-term | LYS 48 | F | Hydrophobic |
| Tyr 4 | NTc.Cm5 | N-term | ILE 50 | F | HBAcceptor |
| Tyr 4 | NTc.Cm5 | N-term | ILE 50 | F | VdWContact |
| Tyr 4 | NTc.Cm5 | N-term | VAL 51 | F | Hydrophobic |
| Tyr 4 | NTc.Cm5 | N-term | SER 49 | F | VdWContact |
| Thr 5 | NTc.Cm4 | N-term | ILE 50 | F | Hydrophobic |
| Thr 5 | NTc.Cm4 | N-term | ILE 50 | F | VdWContact |
| Ser 6 | NTc.Cm3 | N-term | CYS 11 | F | VdWContact |
| Ser 6 | NTc.Cm3 | N-term | ILE 50 | F | HBDonor |
| Ser 6 | NTc.Cm3 | N-term | ILE 50 | F | VdWContact |
| Ser 6 | NTc.Cm3 | N-term | VAL 12 | F | HBAcceptor |
| Ser 6 | NTc.Cm3 | N-term | VAL 12 | F | VdWContact |
| Leu 7 | NTc.Cm2 | N-term | ILE 42 | F | Hydrophobic |
| Leu 7 | NTc.Cm2 | N-term | ARG 10 | F | Hydrophobic |
| Leu 7 | NTc.Cm2 | N-term | ARG 10 | F | VdWContact |
| Leu 7 | NTc.Cm2 | N-term | ILE 50 | F | Hydrophobic |
| Arg 8 | NTc.Cm1 | N-term | ARG 10 | F | HBDonor |
| Arg 8 | NTc.Cm1 | N-term | ARG 10 | F | VdWContact |
| Arg 8 | NTc.Cm1 | N-term | CYS 9 | F | HBDonor |
| Arg 8 | NTc.Cm1 | N-term | CYS 9 | F | VdWContact |
| Arg 8 | NTc.Cm1 | N-term | VAL 12 | F | Hydrophobic |
| Arg 8 | NTc.Cm1 | N-term | VAL 12 | F | VdWContact |
| Arg 8 | NTc.Cm1 | N-term | ARG 8 | F | VdWContact |
| Cys 9 | CX.1 | CX | ARG 8 | F | HBAcceptor |
| Cys 9 | CX.1 | CX | ARG 8 | F | VdWContact |
| Arg 10 | CX.4 | CX | ARG 10 | F | Hydrophobic |
| Arg 10 | CX.4 | CX | GLU 40 | F | Cationic |
| Arg 10 | CX.4 | CX | LEU 30 | F | VdWContact |
| Arg 10 | CX.4 | CX | CYS 36 | F | Cationic |
| Arg 10 | CX.4 | CX | LEU 7 | F | Hydrophobic |
| Arg 10 | CX.4 | CX | LEU 7 | F | VdWContact |
| Arg 10 | CX.4 | CX | ARG 8 | F | HBAcceptor |
| Arg 10 | CX.4 | CX | ARG 8 | F | HBDonor |
| Arg 10 | CX.4 | CX | ARG 8 | F | VdWContact |
| Val 12 | cxb1.1 | N-loop | ARG 8 | F | Hydrophobic |
| Leu 30 | b1b2.4 | 30s-loop | ARG 10 | F | VdWContact |
| Ile 42 | B2.3 | B2 | LEU 7 | F | Hydrophobic |
| Ile 50 | B3.1 | B3 | THR 5 | F | Hydrophobic |
| Ile 50 | B3.1 | B3 | THR 5 | F | VdWContact |
| Ile 50 | B3.1 | B3 | LEU 7 | F | Hydrophobic |
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