Interactions for 8XXH — Binding Partner: CXCL2
Structure details
- PDB ID: 8XXH open_in_new
- Protein: CXCL2_HUMAN
- Organism: Homo sapiens
- UniProt ID: P19875 open_in_new
- Method: Cryo-em
- Resolution: 2.8 Å
- Date: Jan. 15, 2025
- Reference: open_in_new
- State: Dimer
- Chemokine Chain: D
- Partner Chain: E
Chemokine diagram
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Interactions for this Binding Partner
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Chemokine Residue | Generic Number | Segment | Partner Residue | Partner Chain | Interaction Type |
---|---|---|---|---|---|
Gln 24 | 84 | B1 | SER 30 | E | HBAcceptor |
Gln 24 | 84 | B1 | SER 30 | E | VdWContact |
Ser 25 | 85 | B1 | VAL 28 | E | VdWContact |
Val 26 | 86 | B1 | VAL 28 | E | HBAcceptor |
Val 26 | 86 | B1 | VAL 28 | E | HBDonor |
Val 26 | 86 | B1 | VAL 28 | E | VdWContact |
Val 28 | 88 | B1 | LEU 67 | E | Hydrophobic |
Val 28 | 88 | B1 | VAL 26 | E | HBAcceptor |
Val 28 | 88 | B1 | VAL 26 | E | HBDonor |
Val 28 | 88 | B1 | VAL 26 | E | VdWContact |
Val 28 | 88 | B1 | MET 66 | E | Hydrophobic |
Ser 30 | 90 | 30s-loop | MET 66 | E | VdWContact |
His 34 | 94 | 30s-loop | GLN 24 | E | VdWContact |
Thr 38 | 99 | 30s-loop | MET 66 | E | HBDonor |
Thr 38 | 99 | 30s-loop | MET 66 | E | VdWContact |
Val 40 | 101 | B2 | LEU 67 | E | Hydrophobic |
Val 59 | 125 | Helix | LEU 67 | E | Hydrophobic |
Ile 63 | 129 | Helix | LEU 67 | E | Hydrophobic |
Ile 63 | 129 | Helix | LEU 67 | E | VdWContact |
Ile 63 | 129 | Helix | ILE 63 | E | Hydrophobic |
Ile 63 | 129 | Helix | ILE 63 | E | VdWContact |
Met 66 | 132 | Helix | VAL 28 | E | Hydrophobic |
Leu 67 | 133 | Helix | VAL 28 | E | Hydrophobic |
Leu 67 | 133 | Helix | VAL 40 | E | Hydrophobic |
Leu 67 | 133 | Helix | ILE 63 | E | Hydrophobic |
Leu 67 | 133 | Helix | ILE 63 | E | VdWContact |
Leu 67 | 133 | Helix | VAL 59 | E | Hydrophobic |
Asn 69 | 139 | C-term | THR 38 | E | HBAcceptor |
Asn 69 | 139 | C-term | THR 38 | E | VdWContact |
Asn 69 | 139 | C-term | PRO 31 | E | VdWContact |