Interactions for 4RAU — Binding Partner: RTOFab


Structure details

  • Chemokine Chain: F
  • Partner Chain: D,E
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Chemokine diagram

I K A G P H C P T A 30s-loop K N G R 40s-loop D L Q A 50s-loopC-term E D G D L Q C L C V K T T S Q V R P R N-term V E L S T I H Q L I A T L L C I K P L Y K K I I K K L L

Interactions for this Binding Partner

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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Asp 5 NTc.Cm5 N-term LYS 95 D Anionic
Asp 7 NTc.Cm3 N-term LYS 95 D Anionic
Lys 31 b1b2.6 30s-loop SER 55 E VdWContact
Ala 32 b1b2.7 30s-loop TYR 106 E Hydrophobic
Ala 32 b1b2.7 30s-loop TYR 106 E VdWContact
Ala 32 b1b2.7 30s-loop LEU 103 E HBDonor
Ala 32 b1b2.7 30s-loop LEU 103 E VdWContact
Gly 33 b1b2.8 30s-loop TYR 106 E VdWContact
Pro 34 b1b2.9 30s-loop TYR 61 E Hydrophobic
Pro 34 b1b2.9 30s-loop LEU 96 D Hydrophobic
Pro 34 b1b2.9 30s-loop TYR 98 D Hydrophobic
Pro 34 b1b2.9 30s-loop TYR 98 D VdWContact
His 35 b1b2.10 30s-loop TYR 61 E Hydrophobic
Pro 37 b1b2.13 30s-loop TYR 34 D Hydrophobic
Pro 37 b1b2.13 30s-loop TYR 34 D VdWContact
Pro 37 b1b2.13 30s-loop PHE 93 D Hydrophobic
Pro 37 b1b2.13 30s-loop PHE 93 D VdWContact
Pro 37 b1b2.13 30s-loop TYR 106 E VdWContact
Thr 38 b1b2.14 30s-loop LEU 104 E VdWContact
Ala 39 b1b2.16 30s-loop LEU 104 E HBDonor
Ala 39 b1b2.16 30s-loop LEU 104 E VdWContact
Ala 39 b1b2.16 30s-loop LEU 103 E VdWContact
Leu 55 b3h.2 50s-loop LEU 104 E Hydrophobic
Gln 56 b3h.3 50s-loop TYR 105 E HBDonor
Gln 56 b3h.3 50s-loop TYR 105 E VdWContact
Tyr 60 H.3 Helix LEU 104 E Hydrophobic
Ile 63 H.6 Helix LEU 104 E Hydrophobic
Leu 68 CT.1 C-term LEU 103 E Hydrophobic
Leu 68 CT.1 C-term LEU 103 E VdWContact

Interaction pattern search
(0.00 = no similarity, 1.00 = identical)