Interactions
5EKI | CCL21_HUMAN — CCL21
Residue contacts: 59
SUMMARY
- Protein
- CCL21_HUMAN View protein entry
- Organism
- Homo sapiens
- UniProt ID
- O00585 View on UniProt
- PDB ID
- 5EKI View on PDB
- Method
- X-ray
- Resolution
- 1.9 Å
- Date
- Oct. 5, 2016
- Reference
- 10.1021/ACS.BIOCHEM.6B00304 Open DOI
- State
- Oligomer
Chain information
- Chemokine chain
- C
- Partner chain
- B,F
3D VIEW
INTERACTION TABLE
Download CSV| Chemokine Residue | Generic Number | Segment | Partner Residue | Partner Chain | Interaction Type |
|---|---|---|---|---|---|
| Asp 7 | NTc.Cm1 | N-term | PRO 73 | B | Hydrophobic |
| Asp 7 | NTc.Cm1 | N-term | GLN 74 | B | VdWContact |
| Cys 8 | CX.1 | CX | GLN 74 | B | HBAcceptor |
| Cys 8 | CX.1 | CX | GLN 74 | B | HBDonor |
| Cys 8 | CX.1 | CX | GLN 74 | B | VdWContact |
| Leu 10 | cxb1.1 | N-loop | GLN 74 | B | Hydrophobic |
| Lys 11 | cxb1.2 | N-loop | PRO 71 | B | Hydrophobic |
| Lys 11 | cxb1.2 | N-loop | ASP 68 | B | Hydrophobic |
| Lys 11 | cxb1.2 | N-loop | ASP 68 | B | Cationic |
| Ser 13 | cxb1.6 | N-loop | PRO 71 | B | VdWContact |
| Gln 14 | cxb1.7 | N-loop | LYS 69 | B | Hydrophobic |
| Gln 14 | cxb1.7 | N-loop | LYS 69 | B | HBDonor |
| Gln 14 | cxb1.7 | N-loop | LYS 69 | B | VdWContact |
| Arg 15 | cxb1.8 | N-loop | THR 70 | B | Hydrophobic |
| Arg 23 | B1.3 | B1 | SER 47 | F | VdWContact |
| Arg 23 | B1.3 | B1 | ALA 49 | F | Hydrophobic |
| Arg 26 | B1.6 | B1 | ASP 7 | F | HBDonor |
| Arg 26 | B1.6 | B1 | ASP 7 | F | Cationic |
| Arg 26 | B1.6 | B1 | ASP 7 | F | VdWContact |
| Leu 40 | B2.3 | B2 | PRO 73 | B | Hydrophobic |
| Arg 44 | b2b3.2 | 40s-loop | SER 47 | F | HBDonor |
| Arg 44 | b2b3.2 | 40s-loop | SER 47 | F | VdWContact |
| Arg 46 | b2b3.9 | 40s-loop | ARG 23 | B | HBAcceptor |
| Arg 46 | b2b3.9 | 40s-loop | ARG 23 | B | VdWContact |
| Ser 47 | b2b3.10 | 40s-loop | ARG 44 | B | VdWContact |
| Gln 48 | b2b3.11 | 40s-loop | ARG 23 | B | HBAcceptor |
| Gln 48 | b2b3.11 | 40s-loop | ARG 23 | B | VdWContact |
| Ala 49 | b2b3.12 | 40s-loop | ARG 23 | B | Hydrophobic |
| Glu 50 | B3.1 | B3 | PRO 73 | B | Hydrophobic |
| Leu 51 | B3.2 | B3 | THR 70 | B | Hydrophobic |
| Cys 52 | B3.3 | B3 | PRO 71 | B | Hydrophobic |
| Cys 52 | B3.3 | B3 | PRO 71 | B | HBDonor |
| Cys 52 | B3.3 | B3 | PRO 71 | B | VdWContact |
| Asp 68 | CT.1 | C-term | LYS 11 | F | Hydrophobic |
| Asp 68 | CT.1 | C-term | LYS 11 | F | HBAcceptor |
| Asp 68 | CT.1 | C-term | LYS 11 | F | Anionic |
| Asp 68 | CT.1 | C-term | LYS 11 | F | VdWContact |
| Lys 69 | CT.2 | C-term | GLN 14 | F | HBAcceptor |
| Lys 69 | CT.2 | C-term | GLN 14 | F | VdWContact |
| Lys 69 | CT.2 | C-term | SER 13 | F | VdWContact |
| Thr 70 | CT.3 | C-term | ARG 15 | F | Hydrophobic |
| Thr 70 | CT.3 | C-term | LEU 51 | F | VdWContact |
| Pro 71 | CT.4 | C-term | SER 13 | F | VdWContact |
| Pro 71 | CT.4 | C-term | LYS 11 | F | Hydrophobic |
| Pro 71 | CT.4 | C-term | LEU 51 | F | VdWContact |
| Pro 71 | CT.4 | C-term | CYS 52 | F | Hydrophobic |
| Pro 71 | CT.4 | C-term | CYS 52 | F | HBAcceptor |
| Pro 71 | CT.4 | C-term | CYS 52 | F | VdWContact |
| Ser 72 | CT.5 | C-term | GLU 50 | F | VdWContact |
| Pro 73 | CT.6 | C-term | ASP 7 | F | Hydrophobic |
| Pro 73 | CT.6 | C-term | GLU 50 | F | Hydrophobic |
| Pro 73 | CT.6 | C-term | LEU 40 | F | Hydrophobic |
| Pro 73 | CT.6 | C-term | LEU 40 | F | VdWContact |
| Gln 74 | CT.7 | C-term | LEU 10 | F | Hydrophobic |
| Gln 74 | CT.7 | C-term | CYS 8 | F | HBAcceptor |
| Gln 74 | CT.7 | C-term | CYS 8 | F | HBDonor |
| Gln 74 | CT.7 | C-term | CYS 8 | F | VdWContact |
| Pro 76 | CT.44 | C-term | GLY 33 | F | VdWContact |
| Pro 76 | CT.44 | C-term | CYS 8 | F | Hydrophobic |
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