Interactions for 4RAU — Binding Partner: RTOFab


Structure details

  • Chemokine Chain: L
  • Partner Chain: J,K
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Chemokine diagram

I K A G P H C P T A 30s-loop K N G R 40s-loop D L Q A 50s-loopC-term E D G D L Q C L C V K T T S Q V R P R N-term V E L S T I H Q L I A T L L C I K P L Y K K I I K K L L

Interactions for this Binding Partner

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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Asp 7 NTc.Cm3 N-term LYS 95 J Hydrophobic
Asp 7 NTc.Cm3 N-term LYS 95 J VdWContact
Leu 8 NTc.Cm2 N-term LYS 95 J HBAcceptor
Leu 8 NTc.Cm2 N-term LYS 95 J VdWContact
Lys 31 b1b2.6 30s-loop SER 55 K HBDonor
Lys 31 b1b2.6 30s-loop SER 55 K VdWContact
Ala 32 b1b2.7 30s-loop TYR 106 K Hydrophobic
Ala 32 b1b2.7 30s-loop TYR 106 K VdWContact
Ala 32 b1b2.7 30s-loop LEU 103 K HBDonor
Ala 32 b1b2.7 30s-loop LEU 103 K VdWContact
Pro 34 b1b2.9 30s-loop TYR 98 J VdWContact
Pro 34 b1b2.9 30s-loop TYR 61 K Hydrophobic
Pro 34 b1b2.9 30s-loop LEU 96 J Hydrophobic
His 35 b1b2.10 30s-loop TYR 61 K Hydrophobic
His 35 b1b2.10 30s-loop LYS 95 J VdWContact
Pro 37 b1b2.13 30s-loop TYR 106 K VdWContact
Pro 37 b1b2.13 30s-loop PHE 93 J Hydrophobic
Pro 37 b1b2.13 30s-loop TYR 34 J Hydrophobic
Pro 37 b1b2.13 30s-loop TYR 34 J VdWContact
Thr 38 b1b2.14 30s-loop TYR 34 J Hydrophobic
Thr 38 b1b2.14 30s-loop TYR 34 J VdWContact
Ala 39 b1b2.16 30s-loop LEU 104 K HBDonor
Ala 39 b1b2.16 30s-loop LEU 104 K VdWContact
Gln 56 b3h.3 50s-loop TYR 105 K VdWContact
Ile 63 H.6 Helix LEU 104 K Hydrophobic
Ile 64 H.7 Helix LEU 104 K Hydrophobic
Leu 68 CT.1 C-term LEU 103 K Hydrophobic

Interaction pattern search
(0.00 = no similarity, 1.00 = identical)