Interactions for 4RAU — Binding Partner: RTOFab


Structure details

  • Chemokine Chain: R
  • Partner Chain: Q,P
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Chemokine diagram

I K A G P H C P T A 30s-loop K N G R 40s-loop D L Q A 50s-loopC-term E D G D L Q C L C V K T T S Q V R P R N-term V E L S T I H Q L I A T L L C I K P L Y K K I I K K L L

Interactions for this Binding Partner

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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Asp 7 NTc.Cm3 N-term LYS 95 P Hydrophobic
Asp 7 NTc.Cm3 N-term LYS 95 P HBAcceptor
Asp 7 NTc.Cm3 N-term LYS 95 P Anionic
Asp 7 NTc.Cm3 N-term LYS 95 P VdWContact
Lys 31 b1b2.6 30s-loop SER 55 Q HBDonor
Lys 31 b1b2.6 30s-loop SER 55 Q VdWContact
Ala 32 b1b2.7 30s-loop LEU 103 Q HBDonor
Ala 32 b1b2.7 30s-loop LEU 103 Q VdWContact
Ala 32 b1b2.7 30s-loop TYR 106 Q Hydrophobic
Ala 32 b1b2.7 30s-loop TYR 106 Q VdWContact
Gly 33 b1b2.8 30s-loop TYR 106 Q VdWContact
Pro 34 b1b2.9 30s-loop TYR 61 Q Hydrophobic
Pro 34 b1b2.9 30s-loop LEU 96 P Hydrophobic
Pro 34 b1b2.9 30s-loop TYR 98 P Hydrophobic
Pro 34 b1b2.9 30s-loop TYR 98 P VdWContact
His 35 b1b2.10 30s-loop TYR 61 Q Hydrophobic
His 35 b1b2.10 30s-loop TYR 61 Q HBDonor
Pro 37 b1b2.13 30s-loop PHE 93 P Hydrophobic
Pro 37 b1b2.13 30s-loop PHE 93 P VdWContact
Pro 37 b1b2.13 30s-loop TYR 34 P Hydrophobic
Pro 37 b1b2.13 30s-loop TYR 34 P VdWContact
Thr 38 b1b2.14 30s-loop TYR 34 P Hydrophobic
Thr 38 b1b2.14 30s-loop TYR 34 P VdWContact
Ala 39 b1b2.16 30s-loop LEU 104 Q HBDonor
Ala 39 b1b2.16 30s-loop LEU 104 Q VdWContact
Ala 39 b1b2.16 30s-loop LEU 103 Q VdWContact
Ile 63 H.6 Helix LEU 104 Q Hydrophobic
Leu 68 CT.1 C-term LEU 103 Q Hydrophobic
Leu 68 CT.1 C-term LEU 103 Q VdWContact

Interaction pattern search
(0.00 = no similarity, 1.00 = identical)