Interactions for 1F9R — Binding Partner: CXCL4


Structure details

  • Chemokine Chain: C
  • Partner Chain: A,B,D
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Chemokine diagram

I K A G P H C A V P 30s-loop K N G R 40s-loop D L Q A 50s-loopC-term G D L Q C L C V K T T S Q V R P R N-term V E L S T I H Q L I A T L L C I K P L Y K K I I K K L L E S

Interactions for this Binding Partner

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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Leu 208 NTc.Cm2 N-term LYS 114 B HBAcceptor
Leu 208 NTc.Cm2 N-term LYS 114 B VdWContact
Leu 211 CX.4 CX LEU 111 B Hydrophobic
Leu 211 CX.4 CX LEU 111 B VdWContact
Leu 211 CX.4 CX ILE 151 B VdWContact
Leu 211 CX.4 CX CYS 152 B Hydrophobic
Leu 211 CX.4 CX CYS 152 B VdWContact
Leu 211 CX.4 CX LYS 150 B Hydrophobic
Val 213 cxb1.1 N-loop LYS 114 B Hydrophobic
Val 213 cxb1.1 N-loop LYS 114 B VdWContact
Val 213 cxb1.1 N-loop VAL 113 B Hydrophobic
Val 213 cxb1.1 N-loop VAL 113 B VdWContact
Ile 224 B1.2 B1 LYS 331 D VdWContact
Thr 225 B1.3 B1 LYS 331 D HBAcceptor
Thr 225 B1.3 B1 LYS 331 D VdWContact
Ser 226 B1.4 B1 VAL 329 D VdWContact
Leu 227 B1.5 B1 GLU 328 D VdWContact
Leu 227 B1.5 B1 VAL 329 D HBAcceptor
Leu 227 B1.5 B1 VAL 329 D HBDonor
Leu 227 B1.5 B1 VAL 329 D VdWContact
Glu 228 B1.6 B1 LEU 327 D VdWContact
Glu 228 B1.6 B1 GLU 328 D Hydrophobic
Glu 228 B1.6 B1 LYS 150 B HBAcceptor
Glu 228 B1.6 B1 LYS 150 B Anionic
Glu 228 B1.6 B1 LYS 150 B VdWContact
Val 229 B1.7 B1 LEU 327 D HBAcceptor
Val 229 B1.7 B1 LEU 327 D HBDonor
Val 229 B1.7 B1 LEU 327 D VdWContact
Val 229 B1.7 B1 SER 326 D VdWContact
Val 229 B1.7 B1 LEU 367 D Hydrophobic
Val 229 B1.7 B1 LEU 368 D Hydrophobic
Val 229 B1.7 B1 LEU 368 D VdWContact
Ile 230 b1b2.4 30s-loop LYS 150 B Hydrophobic
Lys 231 b1b2.6 30s-loop SER 370 D VdWContact
Lys 231 b1b2.6 30s-loop THR 325 D HBDonor
Lys 231 b1b2.6 30s-loop THR 325 D VdWContact
Lys 231 b1b2.6 30s-loop LEU 367 D Hydrophobic
Lys 231 b1b2.6 30s-loop LEU 367 D VdWContact
Ala 232 b1b2.7 30s-loop SER 370 D HBDonor
Ala 232 b1b2.7 30s-loop SER 370 D VdWContact
His 235 b1b2.10 30s-loop ARG 149 B PiCation
His 235 b1b2.10 30s-loop ARG 149 B VdWContact
Ala 239 b1b2.16 30s-loop LEU 368 D Hydrophobic
Ala 239 b1b2.16 30s-loop LEU 368 D VdWContact
Ala 239 b1b2.16 30s-loop SER 370 D VdWContact
Leu 241 B2.2 B2 LEU 368 D Hydrophobic
Ile 242 B2.3 B2 LYS 150 B Hydrophobic
Lys 246 b2b3.2 40s-loop GLY 48 A VdWContact
Asn 247 b2b3.4 40s-loop THR 25 A HBAcceptor
Asn 247 b2b3.4 40s-loop THR 25 A VdWContact
Arg 249 b2b3.12 40s-loop HIS 135 B CationPi
Lys 250 B3.1 B3 LEU 111 B Hydrophobic
Lys 250 B3.1 B3 LEU 111 B VdWContact
Lys 250 B3.1 B3 GLU 128 B HBDonor
Lys 250 B3.1 B3 GLU 128 B Cationic
Lys 250 B3.1 B3 GLU 128 B VdWContact
Lys 250 B3.1 B3 ILE 130 B Hydrophobic
Lys 250 B3.1 B3 ILE 142 B Hydrophobic
Cys 252 B3.3 B3 LEU 111 B Hydrophobic
Cys 252 B3.3 B3 LEU 111 B VdWContact
Tyr 260 H.3 Helix LEU 368 D Hydrophobic
Ile 264 H.7 Helix ILE 364 D Hydrophobic
Leu 267 H.10 Helix VAL 329 D Hydrophobic
Leu 267 H.10 Helix LYS 331 D Hydrophobic
Leu 268 CT.1 C-term VAL 329 D Hydrophobic
Leu 268 CT.1 C-term LEU 355 D Hydrophobic
Leu 268 CT.1 C-term TYR 360 D Hydrophobic
Leu 268 CT.1 C-term TYR 360 D VdWContact
Ser 270 CT.3 C-term PRO 339 D VdWContact
Ser 270 CT.3 C-term ALA 332 D HBAcceptor
Ser 270 CT.3 C-term ALA 332 D VdWContact

Interaction pattern search
(0.00 = no similarity, 1.00 = identical)