Interactions

5YAM | CCL5_MOUSE — CCL5

Residue contacts: 36
SUMMARY
Protein
CCL5_MOUSE View protein entry
Organism
Mus musculus
UniProt ID
P30882 View on UniProt
PDB ID
5YAM View on PDB
Method
Nmr
Resolution
-
Date
Sept. 5, 2018
Reference
10.1016/J.JMB.2019.12.049 Open DOI
State
Dimer
Chain information
Chemokine chain
B
Partner chain
A
3D VIEW
Powered by NGL viewer
INTERACTION TABLE
Download CSV
Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Met 1 NTc.Cm32 N-term ARG 48 A VdWContact
Ser 2 NTc.Cm9 N-term ARG 48 A VdWContact
Tyr 4 NTc.Cm7 N-term LEU 16 A Hydrophobic
Ser 6 NTc.Cm5 N-term ALA 14 A VdWContact
Ser 6 NTc.Cm5 N-term CYS 51 A HBAcceptor
Ser 6 NTc.Cm5 N-term CYS 51 A VdWContact
Asp 7 NTc.Cm4 N-term GLN 49 A VdWContact
Asp 7 NTc.Cm4 N-term VAL 50 A VdWContact
Asp 7 NTc.Cm4 N-term CYS 51 A VdWContact
Asp 7 NTc.Cm4 N-term CYS 12 A HBAcceptor
Asp 7 NTc.Cm4 N-term CYS 12 A VdWContact
Thr 8 NTc.Cm3 N-term PRO 10 A Hydrophobic
Thr 8 NTc.Cm3 N-term GLN 49 A HBDonor
Thr 8 NTc.Cm3 N-term GLN 49 A VdWContact
Thr 8 NTc.Cm3 N-term VAL 41 A Hydrophobic
Thr 8 NTc.Cm3 N-term CYS 51 A VdWContact
Thr 9 NTc.Cm2 N-term CYS 11 A HBAcceptor
Thr 9 NTc.Cm2 N-term CYS 11 A HBDonor
Thr 9 NTc.Cm2 N-term CYS 11 A VdWContact
Pro 10 NTc.Cm1 N-term THR 9 A VdWContact
Pro 10 NTc.Cm1 N-term THR 8 A Hydrophobic
Cys 11 CX.1 CX THR 9 A HBAcceptor
Cys 11 CX.1 CX THR 9 A HBDonor
Cys 11 CX.1 CX THR 9 A VdWContact
Cys 12 CX.5 CX ASP 7 A VdWContact
Ala 14 cxb1.2 N-loop SER 6 A VdWContact
Leu 16 cxb1.6 N-loop TYR 4 A Hydrophobic
Leu 16 cxb1.6 N-loop TYR 4 A VdWContact
Val 41 B2.3 B2 THR 8 A Hydrophobic
Gln 49 B3.1 B3 THR 8 A HBAcceptor
Gln 49 B3.1 B3 THR 8 A VdWContact
Gln 49 B3.1 B3 ASP 7 A VdWContact
Cys 51 B3.3 B3 SER 6 A HBDonor
Cys 51 B3.3 B3 SER 6 A VdWContact
Cys 51 B3.3 B3 THR 8 A VdWContact
Cys 51 B3.3 B3 ASP 7 A VdWContact
CHEMOKINE DIAGRAM
T S S K C S N L 30s-loop R R N R 40s-loop N P E K 50s-loopC-term M S P Y G S D T T P C C F A Y L S L A L P R A N-term Y F Y E K V H A V V F V T A C V Q K W V Q E Y I N Y L E M S
INTERACTION PATTERN SEARCH
0.00 = no similarity, 1.00 = identical