Interactions for 5L2U — Binding Partner: CCL5


Structure details

  • Chemokine Chain: D
  • Partner Chain: B
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Chemokine diagram

T S G K C S N P 30s-loop R K N R 40s-loop N P E K 50s-loopC-term S D T T P C C F A Y I A R P L P R A N-term Y F Y E K I H A V V F V T A C V Q K W V R E Y I N S L E M S

Interactions for this Binding Partner

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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Phe 12 cxb1.1 N-loop LYS 33 B Hydrophobic
Ala 13 cxb1.2 N-loop LYS 33 B Hydrophobic
Ala 13 cxb1.2 N-loop LYS 33 B VdWContact
Ile 15 cxb1.6 N-loop TYR 29 B Hydrophobic
Arg 17 cxb1.8 N-loop ARG 59 B VdWContact
Arg 17 cxb1.8 N-loop GLU 54 B VdWContact
Leu 19 cxb1.11 N-loop TYR 29 B Hydrophobic
Ala 22 cxb1.16 N-loop MET 67 B Hydrophobic
Ala 22 cxb1.16 N-loop MET 67 B VdWContact
His 23 B1.1 B1 ASN 63 B Hydrophobic
His 23 B1.1 B1 ASN 63 B HBDonor
His 23 B1.1 B1 ASN 63 B VdWContact
His 23 B1.1 B1 ILE 62 B Hydrophobic
His 23 B1.1 B1 GLU 66 B Hydrophobic
His 23 B1.1 B1 MET 67 B Hydrophobic
Thr 43 B2.6 B2 GLU 66 B HBDonor
Thr 43 B2.6 B2 GLU 66 B VdWContact
Arg 44 b2b3.2 40s-loop GLU 66 B VdWContact
Lys 45 b2b3.4 40s-loop GLU 66 B HBDonor
Lys 45 b2b3.4 40s-loop GLU 66 B VdWContact
Lys 45 b2b3.4 40s-loop LEU 65 B VdWContact
Arg 47 b2b3.12 40s-loop GLU 66 B Cationic
Arg 47 b2b3.12 40s-loop GLU 66 B VdWContact
Arg 47 b2b3.12 40s-loop GLU 26 B Cationic
Arg 47 b2b3.12 40s-loop GLU 26 B VdWContact
Arg 47 b2b3.12 40s-loop TYR 27 B Hydrophobic
Arg 47 b2b3.12 40s-loop TYR 27 B HBDonor
Arg 47 b2b3.12 40s-loop TYR 27 B VdWContact
Val 49 B3.2 B3 TYR 29 B Hydrophobic

Interaction pattern search
(0.00 = no similarity, 1.00 = identical)