Interactions for 5L2U — Binding Partner: CCL5


Structure details

  • Chemokine Chain: D
  • Partner Chain: F
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Chemokine diagram

T S G K C S N P 30s-loop R K N R 40s-loop N P E K 50s-loopC-term S D T T P C C F A Y I A R P L P R A N-term Y F Y E K I H A V V F V T A C V Q K W V R E Y I N S L E M S

Interactions for this Binding Partner

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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Glu 26 B1.4 B1 ARG 47 F HBAcceptor
Glu 26 B1.4 B1 ARG 47 F Anionic
Glu 26 B1.4 B1 ARG 47 F VdWContact
Tyr 27 B1.5 B1 ARG 47 F Hydrophobic
Tyr 27 B1.5 B1 ARG 47 F HBAcceptor
Tyr 27 B1.5 B1 ARG 47 F VdWContact
Tyr 29 B1.7 B1 LEU 19 F Hydrophobic
Tyr 29 B1.7 B1 VAL 49 F Hydrophobic
Tyr 29 B1.7 B1 ARG 17 F VdWContact
Tyr 29 B1.7 B1 ILE 15 F Hydrophobic
Lys 33 b1b2.10 30s-loop ALA 13 F Hydrophobic
Pro 37 b1b2.16 30s-loop ARG 17 F VdWContact
Pro 53 b3h.2 50s-loop ARG 17 F VdWContact
Ile 62 H.7 Helix HIS 23 F Hydrophobic
Asn 63 H.8 Helix HIS 23 F Hydrophobic
Asn 63 H.8 Helix HIS 23 F HBAcceptor
Asn 63 H.8 Helix HIS 23 F VdWContact
Glu 66 CT.1 C-term HIS 23 F Hydrophobic
Glu 66 CT.1 C-term ARG 44 F HBAcceptor
Glu 66 CT.1 C-term ARG 44 F VdWContact
Glu 66 CT.1 C-term THR 43 F HBAcceptor
Glu 66 CT.1 C-term THR 43 F VdWContact
Glu 66 CT.1 C-term LYS 45 F HBAcceptor
Glu 66 CT.1 C-term LYS 45 F VdWContact
Met 67 CT.2 C-term ALA 22 F Hydrophobic
Met 67 CT.2 C-term ALA 22 F VdWContact
Met 67 CT.2 C-term HIS 23 F Hydrophobic
Met 67 CT.2 C-term HIS 23 F VdWContact
Met 67 CT.2 C-term ARG 44 F VdWContact
Ser 68 CT.3 C-term LYS 45 F HBAcceptor
Ser 68 CT.3 C-term LYS 45 F VdWContact

Interaction pattern search
(0.00 = no similarity, 1.00 = identical)