Interactions for 5L2U — Binding Partner: CCL5


Structure details

  • Chemokine Chain: F
  • Partner Chain: E
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Chemokine diagram

T S G K C S N P 30s-loop R K N R 40s-loop N P E K 50s-loopC-term S D T T P C C F A Y I A R P L P R A N-term Y F Y E K I H A V V F V T A C V Q K W V R E Y I N S L E M S

Interactions for this Binding Partner

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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Ser 5 NTc.Cm5 N-term CYS 50 E HBAcceptor
Ser 5 NTc.Cm5 N-term CYS 50 E VdWContact
Asp 6 NTc.Cm4 N-term ARG 47 E Anionic
Asp 6 NTc.Cm4 N-term GLN 48 E VdWContact
Thr 7 NTc.Cm3 N-term PRO 9 E Hydrophobic
Thr 7 NTc.Cm3 N-term GLN 48 E Hydrophobic
Thr 7 NTc.Cm3 N-term GLN 48 E HBDonor
Thr 7 NTc.Cm3 N-term GLN 48 E VdWContact
Thr 7 NTc.Cm3 N-term VAL 40 E Hydrophobic
Thr 7 NTc.Cm3 N-term CYS 10 E VdWContact
Thr 8 NTc.Cm2 N-term PHE 12 E Hydrophobic
Thr 8 NTc.Cm2 N-term PHE 12 E VdWContact
Thr 8 NTc.Cm2 N-term CYS 10 E HBAcceptor
Thr 8 NTc.Cm2 N-term CYS 10 E HBDonor
Thr 8 NTc.Cm2 N-term CYS 10 E VdWContact
Pro 9 NTc.Cm1 N-term THR 7 E Hydrophobic
Cys 10 CX.1 CX THR 8 E HBAcceptor
Cys 10 CX.1 CX THR 8 E HBDonor
Cys 10 CX.1 CX THR 8 E VdWContact
Phe 12 cxb1.1 N-loop THR 8 E Hydrophobic
Phe 12 cxb1.1 N-loop THR 8 E VdWContact
Phe 12 cxb1.1 N-loop LYS 33 E Hydrophobic
Phe 12 cxb1.1 N-loop LYS 33 E VdWContact
Lys 33 b1b2.10 30s-loop PHE 12 E Hydrophobic
Val 40 B2.3 B2 THR 7 E Hydrophobic
Arg 47 b2b3.12 40s-loop SER 4 E VdWContact
Gln 48 B3.1 B3 ASP 6 E HBAcceptor
Gln 48 B3.1 B3 ASP 6 E VdWContact
Gln 48 B3.1 B3 SER 4 E HBDonor
Gln 48 B3.1 B3 SER 4 E VdWContact
Gln 48 B3.1 B3 SER 5 E VdWContact
Cys 50 B3.3 B3 ASP 6 E HBDonor
Cys 50 B3.3 B3 ASP 6 E VdWContact

Interaction pattern search
(0.00 = no similarity, 1.00 = identical)