Interactions for 5WB2 — Binding Partner: US28


Structure details

  • Chemokine Chain: B
  • Partner Chain: A
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Chemokine diagram

K R A I I L E T R 30s-loop A D P 40s-loop V K D A 50s-loopC-term L L P H A N Y C A I T C S K M T S K I P V A L L I H Y Q N-term G C S A Q N Q Q H R L F C W Q E K M Q H L D R Q A A A L T

Interactions for this Binding Partner

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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Met 1 NTc.Cm37 N-term PHE 111 A VdWContact
Met 1 NTc.Cm37 N-term TYR 40 A Hydrophobic
Met 1 NTc.Cm37 N-term TYR 40 A VdWContact
Ala 2 NTc.Cm36 N-term PHE 281 A Hydrophobic
Ala 2 NTc.Cm36 N-term PHE 281 A VdWContact
Ala 2 NTc.Cm36 N-term LEU 192 A Hydrophobic
Ala 2 NTc.Cm36 N-term MET 115 A Hydrophobic
Ala 2 NTc.Cm36 N-term GLU 277 A Hydrophobic
Ala 2 NTc.Cm36 N-term GLU 277 A HBDonor
Ala 2 NTc.Cm36 N-term GLU 277 A VdWContact
Ala 2 NTc.Cm36 N-term PHE 111 A Hydrophobic
Ala 2 NTc.Cm36 N-term PHE 111 A VdWContact
Ala 2 NTc.Cm36 N-term TYR 244 A Hydrophobic
Ala 2 NTc.Cm36 N-term TYR 244 A VdWContact
Pro 3 NTc.Cm35 N-term TYR 112 A VdWContact
Pro 3 NTc.Cm35 N-term LEU 192 A Hydrophobic
Pro 3 NTc.Cm35 N-term TYR 244 A HBAcceptor
Pro 3 NTc.Cm35 N-term TYR 244 A VdWContact
Gly 4 NTc.Cm10 N-term LEU 273 A Hydrophobic
Gly 4 NTc.Cm10 N-term LEU 273 A VdWContact
Gly 4 NTc.Cm10 N-term LEU 248 A Hydrophobic
Gly 4 NTc.Cm10 N-term LEU 255 A Hydrophobic
Gly 4 NTc.Cm10 N-term LEU 255 A VdWContact
Gly 4 NTc.Cm10 N-term ASN 189 A HBAcceptor
Gly 4 NTc.Cm10 N-term ASN 189 A VdWContact
Val 5 NTc.Cm9 N-term LEU 273 A Hydrophobic
Val 5 NTc.Cm9 N-term GLU 277 A Hydrophobic
Val 5 NTc.Cm9 N-term GLU 277 A VdWContact
Thr 6 NTc.Cm8 N-term MET 174 A VdWContact
Thr 6 NTc.Cm8 N-term LYS 270 A HBAcceptor
Thr 6 NTc.Cm8 N-term LYS 270 A VdWContact
Lys 7 NTc.Cm7 N-term THR 36 A HBDonor
Lys 7 NTc.Cm7 N-term THR 36 A VdWContact
Lys 7 NTc.Cm7 N-term LEU 93 A Hydrophobic
Lys 7 NTc.Cm7 N-term LEU 29 A Hydrophobic
Lys 7 NTc.Cm7 N-term LEU 29 A VdWContact
Lys 7 NTc.Cm7 N-term LYS 33 A Hydrophobic
Lys 7 NTc.Cm7 N-term LYS 33 A VdWContact
Lys 7 NTc.Cm7 N-term ILE 274 A Hydrophobic
Cys 8 NTc.Cm6 N-term LYS 270 A Anionic
Cys 8 NTc.Cm6 N-term LYS 270 A VdWContact
Cys 8 NTc.Cm6 N-term PHE 25 A VdWContact
Asn 9 NTc.Cm5 N-term PHE 25 A HBAcceptor
Asn 9 NTc.Cm5 N-term PHE 25 A VdWContact
Ile 10 NTc.Cm4 N-term PRO 22 A Hydrophobic
Ile 10 NTc.Cm4 N-term VAL 24 A Hydrophobic
Thr 11 NTc.Cm3 N-term CYS 23 A HBAcceptor
Thr 11 NTc.Cm3 N-term CYS 23 A HBDonor
Thr 11 NTc.Cm3 N-term CYS 23 A VdWContact
Thr 11 NTc.Cm3 N-term PHE 25 A Hydrophobic
Thr 11 NTc.Cm3 N-term PHE 25 A VdWContact
Ser 13 NTc.Cm1 N-term ALA 20 A VdWContact
Asn 30 B1.2 B1 ASP 170 A VdWContact
Gln 31 B1.3 B1 ASP 170 A VdWContact
Ser 33 B1.5 B1 MET 174 A VdWContact
Cys 34 B1.6 B1 MET 174 A Hydrophobic
Cys 34 B1.6 B1 MET 174 A VdWContact
Cys 34 B1.6 B1 TYR 177 A VdWContact
Cys 34 B1.6 B1 LYS 270 A Anionic
Cys 34 B1.6 B1 LYS 270 A VdWContact
Lys 36 b1b2.4 30s-loop ASP 178 A VdWContact
Arg 37 b1b2.6 30s-loop ASP 178 A HBDonor
Arg 37 b1b2.6 30s-loop ASP 178 A VdWContact
Gln 45 B2.1 B2 ASP 17 A HBDonor
Gln 45 B2.1 B2 ASP 17 A VdWContact
Arg 47 B2.3 B2 ASP 17 A Cationic
Arg 47 B2.3 B2 ASP 17 A VdWContact
Arg 47 B2.3 B2 GLU 18 A Cationic
Leu 48 B2.4 B2 THR 21 A VdWContact
Leu 48 B2.4 B2 PRO 22 A Hydrophobic
Phe 49 B2.5 B2 THR 21 A Hydrophobic
Phe 49 B2.5 B2 ASP 19 A VdWContact
Phe 49 B2.5 B2 GLU 18 A VdWContact

Interaction pattern search
(0.00 = no similarity, 1.00 = identical)