Interactions for 5WK3 — Binding Partner: M116


Structure details

  • Chemokine Chain: A
  • Partner Chain: P,Q
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Chemokine diagram

T S E D C S R D 30s-loop V Q G R 40s-loop D P N N 50s-loopC-term E C C L E Y F K G A I P L R N-term Q Y W T K L K A I V F V T S C I A K R V K N A V K Y L Q S L E R

Interactions for this Binding Partner

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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Leu 21 cxb1.15 N-loop VAL 104 Q Hydrophobic
Leu 21 cxb1.15 N-loop TRP 34 P Hydrophobic
Leu 21 cxb1.15 N-loop ASP 103 Q Hydrophobic
Arg 22 cxb1.16 N-loop TRP 33 Q Hydrophobic
Arg 22 cxb1.16 N-loop TRP 33 Q VdWContact
Arg 22 cxb1.16 N-loop VAL 104 Q Hydrophobic
Arg 22 cxb1.16 N-loop VAL 104 Q HBDonor
Arg 22 cxb1.16 N-loop VAL 104 Q VdWContact
Arg 22 cxb1.16 N-loop ARG 59 Q HBAcceptor
Arg 22 cxb1.16 N-loop ARG 59 Q VdWContact
Arg 22 cxb1.16 N-loop TRP 105 Q Hydrophobic
Arg 22 cxb1.16 N-loop TRP 105 Q VdWContact
Arg 22 cxb1.16 N-loop ALA 102 Q HBDonor
Arg 22 cxb1.16 N-loop ALA 102 Q VdWContact
Arg 22 cxb1.16 N-loop GLY 100 Q HBDonor
Arg 22 cxb1.16 N-loop GLY 100 Q VdWContact
Lys 23 B1.1 B1 ASP 57 Q HBDonor
Lys 23 B1.1 B1 ASP 57 Q Cationic
Lys 23 B1.1 B1 ASP 57 Q VdWContact
Lys 23 B1.1 B1 ASP 52 Q HBDonor
Lys 23 B1.1 B1 ASP 52 Q Cationic
Lys 23 B1.1 B1 ASP 52 Q VdWContact
Lys 23 B1.1 B1 ASP 55 Q HBDonor
Lys 23 B1.1 B1 ASP 55 Q Cationic
Lys 23 B1.1 B1 ASP 55 Q VdWContact
Val 44 b2b3.2 40s-loop ARG 59 Q VdWContact
Gln 45 b2b3.4 40s-loop ASP 57 Q HBDonor
Gln 45 b2b3.4 40s-loop ASP 57 Q VdWContact
Asn 60 H.5 Helix PRO 33 P Hydrophobic
Asn 60 H.5 Helix PRO 33 P VdWContact
Tyr 64 H.9 Helix LEU 99 P VdWContact
Tyr 64 H.9 Helix VAL 104 Q Hydrophobic
Tyr 64 H.9 Helix LEU 31 P Hydrophobic
Tyr 64 H.9 Helix TYR 98 P Hydrophobic
Tyr 64 H.9 Helix TYR 98 P HBDonor
Tyr 64 H.9 Helix TYR 98 P VdWContact
Ser 67 CT.2 C-term TYR 98 P HBAcceptor
Ser 67 CT.2 C-term TYR 98 P VdWContact
Leu 68 CT.3 C-term LEU 99 P Hydrophobic
Leu 68 CT.3 C-term TYR 98 P Hydrophobic

Interaction pattern search
(0.00 = no similarity, 1.00 = identical)