Interactions for 5WK3 — Binding Partner: M116


Structure details

  • Chemokine Chain: B
  • Partner Chain: S,R
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Chemokine diagram

T S E D C S R D 30s-loop V Q G R 40s-loop D P N N 50s-loopC-term E C C L E Y F K G A I P L R N-term Q Y W T K L K A I V F V T S C I A K R V K N A V K Y L Q S L E R S

Interactions for this Binding Partner

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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Leu 21 cxb1.15 N-loop ASP 103 S Hydrophobic
Leu 21 cxb1.15 N-loop TRP 34 R Hydrophobic
Leu 21 cxb1.15 N-loop VAL 104 S Hydrophobic
Arg 22 cxb1.16 N-loop GLY 100 S HBDonor
Arg 22 cxb1.16 N-loop GLY 100 S VdWContact
Arg 22 cxb1.16 N-loop ARG 59 S HBAcceptor
Arg 22 cxb1.16 N-loop ARG 59 S VdWContact
Arg 22 cxb1.16 N-loop TRP 105 S Hydrophobic
Arg 22 cxb1.16 N-loop TRP 105 S VdWContact
Arg 22 cxb1.16 N-loop VAL 104 S HBDonor
Arg 22 cxb1.16 N-loop VAL 104 S VdWContact
Arg 22 cxb1.16 N-loop ALA 102 S HBDonor
Arg 22 cxb1.16 N-loop ALA 102 S VdWContact
Arg 22 cxb1.16 N-loop TRP 33 S Hydrophobic
Arg 22 cxb1.16 N-loop TRP 33 S VdWContact
Lys 23 B1.1 B1 ARG 59 S VdWContact
Lys 23 B1.1 B1 ASP 57 S HBDonor
Lys 23 B1.1 B1 ASP 57 S Cationic
Lys 23 B1.1 B1 ASP 57 S VdWContact
Lys 23 B1.1 B1 ASP 52 S HBDonor
Lys 23 B1.1 B1 ASP 52 S Cationic
Lys 23 B1.1 B1 ASP 52 S VdWContact
Lys 23 B1.1 B1 ASP 55 S HBDonor
Lys 23 B1.1 B1 ASP 55 S Cationic
Lys 23 B1.1 B1 ASP 55 S VdWContact
Asn 60 H.5 Helix PRO 33 R Hydrophobic
Asn 60 H.5 Helix PRO 33 R VdWContact
Asn 60 H.5 Helix TRP 34 R Hydrophobic
Tyr 64 H.9 Helix LEU 31 R Hydrophobic
Tyr 64 H.9 Helix TYR 98 R Hydrophobic
Tyr 64 H.9 Helix TYR 98 R HBDonor
Tyr 64 H.9 Helix TYR 98 R VdWContact
Tyr 64 H.9 Helix LEU 99 R VdWContact
Tyr 64 H.9 Helix VAL 104 S Hydrophobic
Ser 67 CT.2 C-term TYR 98 R HBAcceptor
Ser 67 CT.2 C-term TYR 98 R VdWContact
Leu 68 CT.3 C-term TYR 98 R Hydrophobic
Leu 68 CT.3 C-term LEU 99 R Hydrophobic

Interaction pattern search
(0.00 = no similarity, 1.00 = identical)