Interactions

7VL9 | CCL15_HUMAN — CCR1

Residue contacts: 80
SUMMARY
Protein
CCL15_HUMAN View protein entry
Organism
Homo sapiens
UniProt ID
Q16663 View on UniProt
PDB ID
7VL9 View on PDB
Method
Cryo-em
Resolution
2.6 Å
Date
March 23, 2022
Reference
10.1038/S41589-021-00918-Z Open DOI
State
Monomer
Chain information
Chemokine chain
L
Partner chain
R
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INTERACTION TABLE
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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Phe 26 NTc.Cm6 N-term LYS 94 R VdWContact
Phe 26 NTc.Cm6 N-term TYR 113 R Hydrophobic
Phe 26 NTc.Cm6 N-term TYR 113 R VdWContact
Phe 26 NTc.Cm6 N-term TYR 291 R Hydrophobic
Phe 26 NTc.Cm6 N-term TYR 291 R VdWContact
Phe 26 NTc.Cm6 N-term TRP 90 R Hydrophobic
Phe 26 NTc.Cm6 N-term TRP 90 R PiStacking
Phe 26 NTc.Cm6 N-term TYR 41 R Hydrophobic
Phe 26 NTc.Cm6 N-term TYR 41 R VdWContact
Phe 26 NTc.Cm6 N-term LEU 87 R Hydrophobic
His 27 NTc.Cm5 N-term VAL 283 R Hydrophobic
His 27 NTc.Cm5 N-term VAL 283 R VdWContact
His 27 NTc.Cm5 N-term ASP 280 R Hydrophobic
Phe 28 NTc.Cm4 N-term ARG 30 R VdWContact
Phe 28 NTc.Cm4 N-term THR 182 R Hydrophobic
Phe 28 NTc.Cm4 N-term TYR 93 R Hydrophobic
Phe 28 NTc.Cm4 N-term TYR 93 R VdWContact
Phe 28 NTc.Cm4 N-term ASP 97 R VdWContact
Ala 29 NTc.Cm3 N-term ARG 30 R VdWContact
Ala 29 NTc.Cm3 N-term ASP 280 R Hydrophobic
Ala 30 NTc.Cm2 N-term ARG 30 R VdWContact
Asp 31 NTc.Cm1 N-term ARG 30 R HBAcceptor
Asp 31 NTc.Cm1 N-term ARG 30 R Anionic
Asp 31 NTc.Cm1 N-term ARG 30 R VdWContact
Asp 31 NTc.Cm1 N-term LYS 26 R HBAcceptor
Asp 31 NTc.Cm1 N-term LYS 26 R VdWContact
Cys 32 CX.1 CX PRO 23 R VdWContact
Thr 34 cxb1.1 N-loop GLU 272 R Hydrophobic
Thr 34 cxb1.1 N-loop CYS 273 R Hydrophobic
Thr 34 cxb1.1 N-loop CYS 273 R VdWContact
Ser 35 cxb1.2 N-loop ALA 21 R VdWContact
Ile 37 cxb1.6 N-loop ALA 21 R Hydrophobic
Leu 45 B1.1 B1 TYR 18 R Hydrophobic
Met 46 B1.2 B1 TYR 18 R Hydrophobic
Met 46 B1.2 B1 TYR 18 R VdWContact
Phe 50 B1.6 B1 HIS 186 R Hydrophobic
Phe 50 B1.6 B1 GLU 177 R Hydrophobic
Phe 50 B1.6 B1 GLU 177 R VdWContact
Phe 50 B1.6 B1 GLN 175 R Hydrophobic
Phe 50 B1.6 B1 GLN 175 R VdWContact
Glu 51 B1.7 B1 HIS 189 R Hydrophobic
Glu 51 B1.7 B1 LYS 173 R Anionic
Glu 51 B1.7 B1 HIS 186 R VdWContact
Glu 51 B1.7 B1 GLN 175 R VdWContact
Ser 53 b1b2.6 30s-loop SER 184 R HBDonor
Ser 53 b1b2.6 30s-loop SER 184 R VdWContact
Ser 54 b1b2.9 30s-loop LYS 196 R HBAcceptor
Ser 54 b1b2.9 30s-loop LYS 196 R VdWContact
Ser 54 b1b2.9 30s-loop LEU 192 R VdWContact
Ser 54 b1b2.9 30s-loop PHE 187 R HBAcceptor
Ser 54 b1b2.9 30s-loop PHE 187 R VdWContact
Cys 56 b1b2.12 30s-loop LYS 196 R HBAcceptor
Cys 56 b1b2.12 30s-loop LYS 196 R VdWContact
Ser 57 b1b2.13 30s-loop ASP 266 R VdWContact
Ser 57 b1b2.13 30s-loop GLN 265 R VdWContact
Ser 57 b1b2.13 30s-loop ARG 193 R HBAcceptor
Ser 57 b1b2.13 30s-loop ARG 193 R VdWContact
Pro 59 b1b2.16 30s-loop LEU 192 R Hydrophobic
Pro 59 b1b2.16 30s-loop HIS 189 R Hydrophobic
Pro 59 b1b2.16 30s-loop HIS 189 R VdWContact
Ile 62 B2.3 B2 PHE 178 R Hydrophobic
Ile 62 B2.3 B2 PHE 178 R VdWContact
Ile 62 B2.3 B2 PRO 23 R Hydrophobic
Leu 64 B2.5 B2 PHE 178 R Hydrophobic
Leu 64 B2.5 B2 PHE 178 R VdWContact
Thr 65 B2.6 B2 TYR 18 R Hydrophobic
Thr 65 B2.6 B2 TYR 18 R VdWContact
Lys 67 b2b3.4 40s-loop TYR 18 R Hydrophobic
Lys 67 b2b3.4 40s-loop TYR 18 R VdWContact
Arg 69 b2b3.12 40s-loop TYR 18 R CationPi
Arg 69 b2b3.12 40s-loop GLY 19 R VdWContact
Gln 70 B3.1 B3 PRO 23 R Hydrophobic
Gln 70 B3.1 B3 PRO 23 R VdWContact
Gln 70 B3.1 B3 GLN 25 R HBAcceptor
Gln 70 B3.1 B3 GLN 25 R VdWContact
Val 71 B3.2 B3 TYR 18 R Hydrophobic
Val 71 B3.2 B3 TYR 18 R VdWContact
Cys 72 B3.3 B3 PRO 23 R VdWContact
Pro 75 b3h.2 50s-loop HIS 189 R Hydrophobic
Pro 75 b3h.2 50s-loop HIS 189 R VdWContact
CHEMOKINE DIAGRAM
T S S E C S K P 30s-loop K K G R 40s-loop K P S G 50s-loopC-term F H F A A D C C T S Y I S Q S I P C S N-term E F Y S K M L G V I F L T A C V Q P G V Q D C M K K L K P Y
INTERACTION PATTERN SEARCH
0.00 = no similarity, 1.00 = identical