Interactions for 6WZM — Binding Partner: CXCL8


Structure details

  • Chemokine Chain: E
  • Partner Chain: F
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Chemokine diagram

I E S G P H C A N T 30s-loop S D G R 40s-loop D P K E 50s-loopC-term K E L R C Q C I K T Y S K P F H P K N-term V R L E K I F E I I V K L L C L E N W V Q R V V E K F L

Interactions for this Binding Partner

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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Lys 23 B1.3 B1 GLU 29 F Hydrophobic
Lys 23 B1.3 B1 GLU 29 F HBAcceptor
Lys 23 B1.3 B1 GLU 29 F VdWContact
Glu 24 B1.4 B1 ILE 28 F Hydrophobic
Glu 24 B1.4 B1 ARG 26 F Hydrophobic
Glu 24 B1.4 B1 ARG 26 F HBAcceptor
Glu 24 B1.4 B1 ARG 26 F Anionic
Glu 24 B1.4 B1 ARG 26 F VdWContact
Glu 24 B1.4 B1 VAL 27 F VdWContact
Leu 25 B1.5 B1 ARG 26 F VdWContact
Leu 25 B1.5 B1 VAL 27 F Hydrophobic
Leu 25 B1.5 B1 VAL 27 F HBAcceptor
Leu 25 B1.5 B1 VAL 27 F HBDonor
Leu 25 B1.5 B1 VAL 27 F VdWContact
Arg 26 B1.6 B1 GLU 24 F Hydrophobic
Arg 26 B1.6 B1 GLU 24 F HBDonor
Arg 26 B1.6 B1 GLU 24 F Cationic
Arg 26 B1.6 B1 GLU 24 F VdWContact
Arg 26 B1.6 B1 LEU 25 F VdWContact
Arg 26 B1.6 B1 ARG 26 F VdWContact
Val 27 B1.7 B1 GLU 24 F VdWContact
Val 27 B1.7 B1 LEU 25 F Hydrophobic
Val 27 B1.7 B1 LEU 25 F HBAcceptor
Val 27 B1.7 B1 LEU 25 F HBDonor
Val 27 B1.7 B1 LEU 25 F VdWContact
Val 27 B1.7 B1 PHE 65 F Hydrophobic
Val 27 B1.7 B1 PHE 65 F VdWContact
Ile 28 b1b2.4 30s-loop GLU 24 F Hydrophobic
Glu 29 b1b2.6 30s-loop PHE 65 F Hydrophobic
Glu 29 b1b2.6 30s-loop LYS 23 F HBDonor
Glu 29 b1b2.6 30s-loop LYS 23 F VdWContact
Lys 42 B2.5 B2 ALA 2 F VdWContact
Glu 63 H.8 Helix GLU 63 F VdWContact
Phe 65 H.10 Helix GLU 29 F Hydrophobic
Phe 65 H.10 Helix VAL 27 F Hydrophobic

Interaction pattern search
(0.00 = no similarity, 1.00 = identical)