Interactions for 6XMN — Binding Partner: CXCR1 N-terminal peptide
Structure details
- PDB ID: 6XMN open_in_new
- Protein: CXCL8_HUMAN
- Organism: Homo sapiens
- UniProt ID: P10145 open_in_new
- Method: Nmr
- Resolution:
- Date: July 7, 2021
- Reference: open_in_new
- State: Monomer
- Chemokine Chain: A
- Partner Chain: B
Chemokine diagram
Interactions for this Binding Partner
Download list as CSV
| Chemokine Residue | Generic Number | Segment | Partner Residue | Partner Chain | Interaction Type |
|---|---|---|---|---|---|
| Gln 8 | CX.4 | CX | SER 28 | B | HBAcceptor |
| Gln 8 | CX.4 | CX | SER 28 | B | VdWContact |
| Cys 9 | CX.5 | CX | SER 28 | B | VdWContact |
| Ile 10 | cxb1.1 | N-loop | SER 28 | B | VdWContact |
| Ile 10 | cxb1.1 | N-loop | TYR 27 | B | Hydrophobic |
| Lys 11 | cxb1.2 | N-loop | GLU 25 | B | Cationic |
| Lys 11 | cxb1.2 | N-loop | GLU 25 | B | VdWContact |
| Lys 11 | cxb1.2 | N-loop | TYR 27 | B | Hydrophobic |
| Lys 11 | cxb1.2 | N-loop | TYR 27 | B | VdWContact |
| Lys 11 | cxb1.2 | N-loop | ASP 26 | B | VdWContact |
| Tyr 13 | cxb1.6 | N-loop | GLU 25 | B | Hydrophobic |
| Tyr 13 | cxb1.6 | N-loop | GLU 25 | B | VdWContact |
| Tyr 13 | cxb1.6 | N-loop | PRO 22 | B | HBDonor |
| Tyr 13 | cxb1.6 | N-loop | ASP 26 | B | Hydrophobic |
| Tyr 13 | cxb1.6 | N-loop | ASP 26 | B | VdWContact |
| Ser 14 | cxb1.7 | N-loop | GLU 25 | B | HBDonor |
| Ser 14 | cxb1.7 | N-loop | GLU 25 | B | VdWContact |
| Lys 15 | cxb1.8 | N-loop | PRO 21 | B | Hydrophobic |
| Lys 15 | cxb1.8 | N-loop | PRO 21 | B | VdWContact |
| Lys 15 | cxb1.8 | N-loop | ALA 23 | B | VdWContact |
| Lys 15 | cxb1.8 | N-loop | PRO 22 | B | HBDonor |
| Lys 15 | cxb1.8 | N-loop | PRO 22 | B | VdWContact |
| Lys 15 | cxb1.8 | N-loop | MET 20 | B | VdWContact |
| Pro 16 | cxb1.10 | N-loop | MET 20 | B | VdWContact |
| Phe 17 | cxb1.11 | N-loop | PRO 21 | B | Hydrophobic |
| Phe 17 | cxb1.11 | N-loop | PRO 21 | B | VdWContact |
| Phe 17 | cxb1.11 | N-loop | ASN 16 | B | HBAcceptor |
| Phe 17 | cxb1.11 | N-loop | ASN 16 | B | VdWContact |
| His 18 | cxb1.14 | N-loop | LEU 15 | B | Hydrophobic |
| His 18 | cxb1.14 | N-loop | LEU 15 | B | VdWContact |
| His 18 | cxb1.14 | N-loop | ASP 14 | B | Hydrophobic |
| His 18 | cxb1.14 | N-loop | ASP 14 | B | HBDonor |
| His 18 | cxb1.14 | N-loop | ASP 14 | B | VdWContact |
| Pro 19 | cxb1.15 | N-loop | ASP 14 | B | Hydrophobic |
| Pro 19 | cxb1.15 | N-loop | ASP 14 | B | VdWContact |
| Phe 21 | B1.1 | B1 | PRO 21 | B | Hydrophobic |
| Leu 43 | B2.6 | B2 | PRO 21 | B | Hydrophobic |
| Leu 43 | B2.6 | B2 | PRO 22 | B | Hydrophobic |
| Leu 43 | B2.6 | B2 | PRO 22 | B | VdWContact |
| Gly 46 | b2b3.11 | 40s-loop | PRO 22 | B | VdWContact |
| Arg 47 | b2b3.12 | 40s-loop | ASP 24 | B | HBDonor |
| Arg 47 | b2b3.12 | 40s-loop | ASP 24 | B | Cationic |
| Arg 47 | b2b3.12 | 40s-loop | ASP 24 | B | VdWContact |
| Arg 47 | b2b3.12 | 40s-loop | ALA 23 | B | VdWContact |
| Arg 47 | b2b3.12 | 40s-loop | ASP 26 | B | Cationic |
| Arg 47 | b2b3.12 | 40s-loop | ASP 26 | B | VdWContact |
| Leu 49 | B3.2 | B3 | ASP 26 | B | Hydrophobic |
| Leu 49 | B3.2 | B3 | ASP 26 | B | VdWContact |
| Cys 50 | B3.3 | B3 | ASP 26 | B | Hydrophobic |
| Cys 50 | B3.3 | B3 | ASP 26 | B | VdWContact |
| Trp 57 | H.2 | Helix | ASN 16 | B | Hydrophobic |
| Trp 57 | H.2 | Helix | ASN 16 | B | VdWContact |
| Arg 60 | H.5 | Helix | LEU 15 | B | VdWContact |
| Arg 60 | H.5 | Helix | ASP 13 | B | HBDonor |
| Arg 60 | H.5 | Helix | ASP 13 | B | Cationic |
| Arg 60 | H.5 | Helix | ASP 13 | B | VdWContact |
| Arg 60 | H.5 | Helix | ASP 14 | B | HBDonor |
| Arg 60 | H.5 | Helix | ASP 14 | B | VdWContact |
| Lys 64 | H.9 | Helix | PHE 12 | B | VdWContact |
| Lys 64 | H.9 | Helix | ASP 13 | B | VdWContact |
| Lys 64 | H.9 | Helix | ASP 14 | B | Hydrophobic |
| Lys 64 | H.9 | Helix | ASP 11 | B | HBDonor |
| Lys 64 | H.9 | Helix | ASP 11 | B | Cationic |
| Lys 64 | H.9 | Helix | ASP 11 | B | VdWContact |
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