Interactions

8XVU | CXCL2_HUMAN — CXCL2

Residue contacts: 30
SUMMARY
Protein
CXCL2_HUMAN View protein entry
Organism
Homo sapiens
UniProt ID
P19875 View on UniProt
PDB ID
8XVU View on PDB
Method
Cryo-em
Resolution
3.09 Å
Date
Jan. 15, 2025
Reference
-
State
Dimer
Chain information
Chemokine chain
D
Partner chain
E
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INTERACTION TABLE
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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Gln 24 B1.3 B1 SER 30 E HBAcceptor
Gln 24 B1.3 B1 SER 30 E VdWContact
Ser 25 B1.4 B1 VAL 28 E VdWContact
Val 26 B1.5 B1 VAL 28 E HBAcceptor
Val 26 B1.5 B1 VAL 28 E HBDonor
Val 26 B1.5 B1 VAL 28 E VdWContact
Val 28 B1.7 B1 LEU 67 E Hydrophobic
Val 28 B1.7 B1 MET 66 E Hydrophobic
Val 28 B1.7 B1 VAL 26 E HBAcceptor
Val 28 B1.7 B1 VAL 26 E HBDonor
Val 28 B1.7 B1 VAL 26 E VdWContact
Ser 30 b1b2.6 30s-loop MET 66 E VdWContact
His 34 b1b2.10 30s-loop GLN 24 E VdWContact
Thr 38 b1b2.16 30s-loop MET 66 E HBDonor
Thr 38 b1b2.16 30s-loop MET 66 E VdWContact
Val 40 B2.2 B2 LEU 67 E Hydrophobic
Val 59 H.3 Helix LEU 67 E Hydrophobic
Ile 63 H.7 Helix LEU 67 E Hydrophobic
Ile 63 H.7 Helix LEU 67 E VdWContact
Ile 63 H.7 Helix ILE 63 E Hydrophobic
Ile 63 H.7 Helix ILE 63 E VdWContact
Met 66 H.10 Helix VAL 28 E Hydrophobic
Leu 67 CT.1 C-term VAL 59 E Hydrophobic
Leu 67 CT.1 C-term VAL 28 E Hydrophobic
Leu 67 CT.1 C-term ILE 63 E Hydrophobic
Leu 67 CT.1 C-term ILE 63 E VdWContact
Leu 67 CT.1 C-term VAL 40 E Hydrophobic
Asn 69 CT.7 C-term PRO 31 E VdWContact
Asn 69 CT.7 C-term THR 38 E HBAcceptor
Asn 69 CT.7 C-term THR 38 E VdWContact
CHEMOKINE DIAGRAM
K S P G P H C A Q T 30s-loop K N G Q 40s-loop N P A S 50s-loopC-term A P L A T E L R C Q C L Q T L Q G I H L K N-term V K V S Q I N E V I A T L L C A K P M V K K I I E K M L K N
INTERACTION PATTERN SEARCH
0.00 = no similarity, 1.00 = identical