Interactions

8XWA | CXCL1_HUMAN — CXCR2

Residue contacts: 54
SUMMARY
Protein
CXCL1_HUMAN View protein entry
Organism
Homo sapiens
UniProt ID
P09341 View on UniProt
PDB ID
8XWA View on PDB
Method
Cryo-em
Resolution
3.48 Å
Date
Jan. 15, 2025
Reference
-
State
Dimer
Chain information
Chemokine chain
D
Partner chain
R
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INTERACTION TABLE
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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Ser 2 NTc.Cm7 N-term SER 43 R HBAcceptor
Ser 2 NTc.Cm7 N-term SER 43 R VdWContact
Ser 2 NTc.Cm7 N-term SER 193 R HBAcceptor
Ser 2 NTc.Cm7 N-term SER 193 R VdWContact
Ser 2 NTc.Cm7 N-term VAL 192 R VdWContact
Ala 4 NTc.Cm5 N-term VAL 192 R Hydrophobic
Thr 5 NTc.Cm4 N-term LEU 296 R Hydrophobic
Glu 6 NTc.Cm3 N-term ARG 278 R HBAcceptor
Glu 6 NTc.Cm3 N-term ARG 278 R Anionic
Glu 6 NTc.Cm3 N-term ARG 278 R VdWContact
Glu 6 NTc.Cm3 N-term ARG 212 R Anionic
Glu 6 NTc.Cm3 N-term ARG 208 R HBAcceptor
Glu 6 NTc.Cm3 N-term ARG 208 R Anionic
Glu 6 NTc.Cm3 N-term ARG 208 R VdWContact
Glu 6 NTc.Cm3 N-term LEU 296 R Hydrophobic
Leu 7 NTc.Cm2 N-term ARG 278 R HBAcceptor
Leu 7 NTc.Cm2 N-term ARG 278 R VdWContact
Leu 7 NTc.Cm2 N-term VAL 187 R Hydrophobic
Leu 7 NTc.Cm2 N-term TYR 197 R Hydrophobic
Leu 7 NTc.Cm2 N-term TYR 197 R VdWContact
Arg 8 NTc.Cm1 N-term ASP 293 R HBDonor
Arg 8 NTc.Cm1 N-term ASP 293 R Cationic
Arg 8 NTc.Cm1 N-term ASP 293 R VdWContact
Arg 8 NTc.Cm1 N-term MET 277 R VdWContact
Arg 8 NTc.Cm1 N-term ASP 274 R HBDonor
Arg 8 NTc.Cm1 N-term ASP 274 R Cationic
Arg 8 NTc.Cm1 N-term ASP 274 R VdWContact
Arg 8 NTc.Cm1 N-term ARG 289 R VdWContact
Cys 9 CX.1 CX ARG 289 R HBAcceptor
Cys 9 CX.1 CX ARG 289 R VdWContact
Gln 10 CX.4 CX ASN 191 R VdWContact
Gln 10 CX.4 CX PRO 38 R VdWContact
Gln 10 CX.4 CX CYS 39 R HBAcceptor
Gln 10 CX.4 CX CYS 39 R VdWContact
Leu 12 cxb1.1 N-loop CYS 39 R Hydrophobic
Leu 12 cxb1.1 N-loop GLU 284 R Hydrophobic
Leu 15 cxb1.6 N-loop LEU 34 R Hydrophobic
Leu 15 cxb1.6 N-loop ALA 36 R Hydrophobic
Ile 18 cxb1.11 N-loop LEU 34 R Hydrophobic
Pro 31 b1b2.7 30s-loop ASN 202 R Hydrophobic
Pro 33 b1b2.9 30s-loop ARG 185 R VdWContact
Pro 33 b1b2.9 30s-loop VAL 187 R Hydrophobic
Pro 33 b1b2.9 30s-loop THR 204 R Hydrophobic
Pro 33 b1b2.9 30s-loop THR 204 R VdWContact
Pro 33 b1b2.9 30s-loop ASP 199 R Hydrophobic
Ala 36 b1b2.13 30s-loop ALA 205 R Hydrophobic
Ile 41 B2.3 B2 PRO 38 R Hydrophobic
Leu 44 B2.6 B2 LEU 34 R Hydrophobic
Leu 44 B2.6 B2 LEU 34 R VdWContact
Arg 48 b2b3.12 40s-loop LEU 34 R VdWContact
Lys 49 B3.1 B3 PRO 38 R Hydrophobic
Lys 49 B3.1 B3 PRO 38 R VdWContact
Ala 50 B3.2 B3 LEU 34 R Hydrophobic
Cys 51 B3.3 B3 ALA 36 R Hydrophobic
CHEMOKINE DIAGRAM
K S P G P H C A Q T 30s-loop K N G R 40s-loop N P A S 50s-loopC-term A S V A T E L R C Q C L Q T L Q G I H P K N-term V N V S Q I N E V I A T L L C A K P I V K K I I E K M L N
INTERACTION PATTERN SEARCH
0.00 = no similarity, 1.00 = identical