Interactions

8XWA | CXCL1_HUMAN — CXCL1

Residue contacts: 31
SUMMARY
Protein
CXCL1_HUMAN View protein entry
Organism
Homo sapiens
UniProt ID
P09341 View on UniProt
PDB ID
8XWA View on PDB
Method
Cryo-em
Resolution
3.48 Å
Date
Jan. 15, 2025
Reference
-
State
Dimer
Chain information
Chemokine chain
E
Partner chain
D
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INTERACTION TABLE
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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Gln 24 B1.3 B1 SER 30 D HBAcceptor
Gln 24 B1.3 B1 SER 30 D VdWContact
Val 26 B1.5 B1 VAL 28 D HBAcceptor
Val 26 B1.5 B1 VAL 28 D HBDonor
Val 26 B1.5 B1 VAL 28 D VdWContact
Val 28 B1.7 B1 VAL 26 D HBAcceptor
Val 28 B1.7 B1 VAL 26 D HBDonor
Val 28 B1.7 B1 VAL 26 D VdWContact
Val 28 B1.7 B1 SER 25 D VdWContact
Val 28 B1.7 B1 LEU 67 D Hydrophobic
Ser 30 b1b2.6 30s-loop GLN 24 D HBDonor
Ser 30 b1b2.6 30s-loop GLN 24 D VdWContact
Val 40 B2.2 B2 LEU 67 D Hydrophobic
Lys 60 H.4 Helix LEU 67 D Hydrophobic
Ile 63 H.7 Helix ILE 63 D Hydrophobic
Ile 63 H.7 Helix ILE 63 D VdWContact
Ile 63 H.7 Helix LEU 67 D Hydrophobic
Ile 63 H.7 Helix LEU 67 D VdWContact
Glu 64 H.8 Helix LYS 60 D Anionic
Glu 64 H.8 Helix LYS 60 D VdWContact
Met 66 H.10 Helix SER 30 D VdWContact
Met 66 H.10 Helix THR 38 D VdWContact
Met 66 H.10 Helix VAL 28 D Hydrophobic
Leu 67 CT.1 C-term PRO 54 D Hydrophobic
Leu 67 CT.1 C-term LYS 60 D Hydrophobic
Leu 67 CT.1 C-term VAL 40 D Hydrophobic
Leu 67 CT.1 C-term THR 38 D Hydrophobic
Leu 67 CT.1 C-term VAL 28 D Hydrophobic
Leu 67 CT.1 C-term ILE 63 D Hydrophobic
Leu 67 CT.1 C-term ILE 63 D VdWContact
Asn 68 CT.2 C-term LYS 60 D VdWContact
CHEMOKINE DIAGRAM
K S P G P H C A Q T 30s-loop K N G R 40s-loop N P A S 50s-loopC-term V N V S Q I N E V I A T L L C A K P I V K K I I E K M L N S
INTERACTION PATTERN SEARCH
0.00 = no similarity, 1.00 = identical