Interactions for 7S5A — Binding Partner: CCL8
Structure details
- PDB ID: 7S5A open_in_new
- Protein: CCL8_HUMAN
- Organism: Homo sapiens
- UniProt ID: P80075 open_in_new
- Method: X-ray
- Resolution: 1.37 Å
- Date: Sept. 29, 2021
- Reference: 10.1073/PNAS.2122105119 open_in_new
- State: Dimer
- Chemokine Chain: B
- Partner Chain: A
Interactions for this Binding Partner
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| Chemokine Residue | Generic Number | Segment | Partner Residue | Partner Chain | Interaction Type |
|---|---|---|---|---|---|
Chemokine Residue | Generic Number | Segment | Partner Residue | Partner Chain | Interaction Type |
|---|---|---|---|---|---|
| Arg 18 | cxb1.8 | N-loop | ASP 3 | A | HBDonor |
| Arg 18 | cxb1.8 | N-loop | ASP 3 | A | Cationic |
| Arg 18 | cxb1.8 | N-loop | ASP 3 | A | VdWContact |
| Asn 14 | cxb1.2 | N-loop | VAL 5 | A | Hydrophobic |
| Asn 14 | cxb1.2 | N-loop | VAL 5 | A | VdWContact |
| Cys 11 | CX.1 | CX | ILE 9 | A | HBAcceptor |
| Cys 11 | CX.1 | CX | ILE 9 | A | HBDonor |
| Cys 11 | CX.1 | CX | ILE 9 | A | VdWContact |
| Cys 52 | B3.3 | B3 | SER 6 | A | HBDonor |
| Cys 52 | B3.3 | B3 | SER 6 | A | VdWContact |
| Gln 35 | b1b2.10 | 30s-loop | PHE 13 | A | Hydrophobic |
| Glu 50 | B3.1 | B3 | PRO 8 | A | Hydrophobic |
| Ile 16 | cxb1.6 | N-loop | SER 6 | A | HBAcceptor |
| Ile 16 | cxb1.6 | N-loop | SER 6 | A | VdWContact |
| Ile 16 | cxb1.6 | N-loop | ASP 3 | A | Hydrophobic |
| Ile 16 | cxb1.6 | N-loop | ASP 3 | A | VdWContact |
| Ile 42 | B2.3 | B2 | PRO 8 | A | Hydrophobic |
| Ile 9 | NTc.Cm2 | N-term | CYS 11 | A | HBAcceptor |
| Ile 9 | NTc.Cm2 | N-term | CYS 11 | A | HBDonor |
| Ile 9 | NTc.Cm2 | N-term | CYS 11 | A | VdWContact |
| Ile 9 | NTc.Cm2 | N-term | PHE 13 | A | Hydrophobic |
| Phe 13 | cxb1.1 | N-loop | GLN 35 | A | Hydrophobic |
| Phe 13 | cxb1.1 | N-loop | ILE 9 | A | Hydrophobic |
| Pro 8 | NTc.Cm3 | N-term | THR 10 | A | Hydrophobic |
| Pro 8 | NTc.Cm3 | N-term | THR 10 | A | VdWContact |
| Pro 8 | NTc.Cm3 | N-term | GLU 50 | A | Hydrophobic |
| Pro 8 | NTc.Cm3 | N-term | ILE 42 | A | Hydrophobic |
| Ser 6 | NTc.Cm5 | N-term | CYS 52 | A | HBAcceptor |
| Ser 6 | NTc.Cm5 | N-term | CYS 52 | A | VdWContact |
| Thr 10 | NTc.Cm1 | N-term | PRO 8 | A | Hydrophobic |
| Thr 10 | NTc.Cm1 | N-term | PRO 8 | A | VdWContact |
| Thr 10 | NTc.Cm1 | N-term | THR 10 | A | HBDonor |
| Thr 10 | NTc.Cm1 | N-term | THR 10 | A | VdWContact |
| Val 15 | cxb1.5 | N-loop | SER 6 | A | HBAcceptor |
| Val 15 | cxb1.5 | N-loop | SER 6 | A | VdWContact |
| Val 5 | NTc.Cm6 | N-term | PHE 13 | A | Hydrophobic |
| Val 5 | NTc.Cm6 | N-term | ASN 14 | A | Hydrophobic |
| Val 5 | NTc.Cm6 | N-term | ASN 14 | A | HBAcceptor |
Showing 1 to 38 of 38 entries
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