Interactions for 5D65 — Binding Partner: CCL3


Structure details

  • Chemokine Chain: B
  • Partner Chain: A,C,D,E
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Chemokine diagram

S S Q C S K P G 30s-loop K R S R 40s-loop D P S E 50s-loopC-term L A A D T P T A C C F S Y T S R Q I P Q N F N-term T E F Y D A I V I F L T A C V Q E W V Q K Y V S D L E L S
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Interactions for this Binding Partner

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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Leu 3 55 N-term ALA 10 D Hydrophobic
Leu 3 55 N-term ILE 41 D Hydrophobic
Leu 3 55 N-term GLN 49 D VdWContact
Leu 3 55 N-term PHE 29 D Hydrophobic
Leu 3 55 N-term PHE 29 D VdWContact
Ala 5 57 N-term GLU 30 D VdWContact
Ala 5 57 N-term SER 32 D VdWContact
Asp 6 58 N-term SER 33 D HBAcceptor
Asp 6 58 N-term SER 33 D VdWContact
Asp 6 58 N-term SER 14 C HBAcceptor
Asp 6 58 N-term SER 14 C VdWContact
Asp 6 58 N-term THR 16 C VdWContact
Asp 6 58 N-term SER 32 D HBAcceptor
Asp 6 58 N-term SER 32 D VdWContact
Asp 6 58 N-term CYS 51 C HBAcceptor
Asp 6 58 N-term CYS 51 C VdWContact
Pro 8 60 N-term ALA 10 C Hydrophobic
Pro 8 60 N-term GLN 49 C Hydrophobic
Pro 8 60 N-term ILE 41 C Hydrophobic
Pro 8 60 N-term ILE 41 C VdWContact
Pro 8 60 N-term CYS 51 C VdWContact
Thr 9 61 N-term CYS 11 C HBAcceptor
Thr 9 61 N-term CYS 11 C HBDonor
Thr 9 61 N-term CYS 11 C VdWContact
Thr 9 61 N-term PHE 13 C Hydrophobic
Thr 9 61 N-term PHE 13 C VdWContact
Thr 9 61 N-term BGC 101 D HBDonor
Thr 9 61 N-term BGC 101 D VdWContact
Ala 10 62 N-term LEU 3 A Hydrophobic
Ala 10 62 N-term PRO 8 C Hydrophobic
Ala 10 62 N-term LEU 3 D Hydrophobic
Ala 10 62 N-term LEU 3 D VdWContact
Cys 11 63 CX THR 9 C HBAcceptor
Cys 11 63 CX THR 9 C HBDonor
Cys 11 63 CX THR 9 C VdWContact
Phe 13 68 N-loop GLN 34 C Hydrophobic
Phe 13 68 N-loop GLN 34 C VdWContact
Phe 13 68 N-loop THR 9 C Hydrophobic
Phe 13 68 N-loop THR 9 C VdWContact
Tyr 15 70 N-loop SER 33 A HBAcceptor
Tyr 15 70 N-loop SER 33 A VdWContact
Thr 16 71 N-loop ASP 6 C VdWContact
Asn 23 81 N-loop LEU 68 A Hydrophobic
Phe 24 82 N-loop GLU 67 A Hydrophobic
Phe 24 82 N-loop GLU 67 A VdWContact
Phe 24 82 N-loop LEU 68 A Hydrophobic
Phe 24 82 N-loop VAL 63 A Hydrophobic
Phe 24 82 N-loop SER 64 A VdWContact
Asp 27 85 B1 ARG 48 E HBAcceptor
Asp 27 85 B1 ARG 48 E Anionic
Asp 27 85 B1 ARG 48 E VdWContact
Asp 27 85 B1 ARG 46 E HBAcceptor
Asp 27 85 B1 ARG 46 E Anionic
Asp 27 85 B1 ARG 46 E VdWContact
Tyr 28 86 B1 ARG 48 E PiCation
Tyr 28 86 B1 ARG 48 E VdWContact
Tyr 28 86 B1 ARG 46 E Hydrophobic
Phe 29 87 B1 LEU 3 D Hydrophobic
Phe 29 87 B1 ARG 48 E PiCation
Phe 29 87 B1 ARG 48 E VdWContact
Glu 30 88 B1 ALA 5 D VdWContact
Ser 32 90 30s-loop ALA 5 D VdWContact
Ser 32 90 30s-loop BGC 101 D HBAcceptor
Ser 32 90 30s-loop BGC 101 D VdWContact
Ser 32 90 30s-loop ASP 6 D HBDonor
Ser 32 90 30s-loop ASP 6 D VdWContact
Ser 33 91 30s-loop SER 17 E VdWContact
Ser 33 91 30s-loop TYR 15 E HBDonor
Ser 33 91 30s-loop TYR 15 E VdWContact
Ser 33 91 30s-loop ASP 6 D HBDonor
Ser 33 91 30s-loop ASP 6 D VdWContact
Gln 34 94 30s-loop PHE 13 C Hydrophobic
Gln 34 94 30s-loop PHE 13 C VdWContact
Cys 35 95 30s-loop GLC 101 E VdWContact
Pro 38 99 30s-loop GLC 101 E VdWContact
Ile 41 102 B2 PRO 8 C Hydrophobic
Ile 41 102 B2 LEU 3 D Hydrophobic
Thr 44 105 B2 GLU 67 A HBDonor
Thr 44 105 B2 GLU 67 A VdWContact
Lys 45 106 40s-loop GLU 67 A VdWContact
Arg 46 112 40s-loop GLU 67 A Hydrophobic
Arg 46 112 40s-loop GLU 67 A HBDonor
Arg 46 112 40s-loop GLU 67 A VdWContact
Arg 46 112 40s-loop TYR 28 A Hydrophobic
Arg 46 112 40s-loop ASP 27 A HBDonor
Arg 46 112 40s-loop ASP 27 A Cationic
Arg 46 112 40s-loop ASP 27 A VdWContact
Arg 46 112 40s-loop LEU 66 A HBDonor
Arg 46 112 40s-loop LEU 66 A VdWContact
Arg 46 112 40s-loop ALA 26 A VdWContact
Arg 46 112 40s-loop BGC 101 A HBDonor
Arg 46 112 40s-loop BGC 101 A VdWContact
Arg 48 114 40s-loop ASP 27 A HBDonor
Arg 48 114 40s-loop ASP 27 A Cationic
Arg 48 114 40s-loop ASP 27 A VdWContact
Arg 48 114 40s-loop TYR 28 A HBDonor
Arg 48 114 40s-loop TYR 28 A VdWContact
Gln 49 115 B3 THR 7 C Hydrophobic
Gln 49 115 B3 LEU 3 D VdWContact
Cys 51 117 B3 PRO 8 C VdWContact
Cys 51 117 B3 ASP 6 C HBDonor
Cys 51 117 B3 ASP 6 C VdWContact
Val 63 129 Helix PHE 24 E Hydrophobic
Ser 64 130 Helix PHE 24 E VdWContact
Leu 66 132 Helix ARG 46 E HBAcceptor
Leu 66 132 Helix ARG 46 E VdWContact
Glu 67 133 Helix PHE 24 E Hydrophobic
Glu 67 133 Helix LYS 45 E VdWContact
Glu 67 133 Helix ARG 46 E HBAcceptor
Glu 67 133 Helix ARG 46 E VdWContact
Leu 68 134 Helix PHE 24 E Hydrophobic

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