Interactions for 5D65 — Binding Partner: Heparin


Structure details

  • Chemokine Chain: B
  • Partner Chain: F,G
Download Full PDB

3D view

NGL viewer powered by MMTF.


Chemokine diagram

S S Q C S K P G 30s-loop K R S R 40s-loop D P S E 50s-loopC-term L A A D T P T A C C F S Y T S R Q I P Q N F N-term T E F Y D A I V I F L T A C V Q E W V Q K Y V S D L E L S
Pick color:
 
 
 
 
 
 
 
 
 
 
 
 


Interactions for this Binding Partner

Download list in excel
Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Gln 19 74 N-loop IDS 1 G HBDonor
Gln 19 74 N-loop IDS 1 G VdWContact
Gln 22 80 N-loop SGN 2 G VdWContact
Asn 23 81 N-loop SGN 2 G VdWContact
Ala 26 84 B1 SGN 2 F VdWContact
Lys 45 106 40s-loop SGN 2 F HBDonor
Lys 45 106 40s-loop SGN 2 F VdWContact
Lys 61 127 Helix IDS 1 G VdWContact
Lys 61 127 Helix SGN 2 G HBDonor
Lys 61 127 Helix SGN 2 G Cationic
Lys 61 127 Helix SGN 2 G VdWContact
Asp 65 131 Helix SGN 2 G VdWContact

Interaction pattern search
Search complexes with similar interaction patterns:

Specify the minimum similarity (0.00 no similarity, 1.00 identical)