Interactions for 1NCV — Binding Partner: CCL7


Structure details

  • Chemokine Chain: A
  • Partner Chain: B
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Chemokine diagram

T S S H C P R E A 30s-loop K L D K 40s-loop D P T Q 50s-loopC-term Q P V G I N T S T T C C Y R F I N K K I P K Q R N-term T R R Y S E L V I F K T A C I E K W V Q D F M K H L D K K T Q T P K L
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Interactions for this Binding Partner

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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Gln 1 53 N-term GLN 72 B VdWContact
Gln 1 53 N-term THR 73 B VdWContact
Gln 1 53 N-term THR 71 B Hydrophobic
Gln 1 53 N-term THR 71 B VdWContact
Gln 1 53 N-term LEU 76 B Hydrophobic
Gln 1 53 N-term LEU 76 B VdWContact
Pro 2 54 N-term GLN 72 B Hydrophobic
Pro 2 54 N-term GLN 72 B VdWContact
Pro 2 54 N-term THR 73 B VdWContact
Pro 2 54 N-term THR 71 B VdWContact
Pro 2 54 N-term LEU 76 B VdWContact
Val 3 55 N-term PRO 74 B VdWContact
Gly 4 56 N-term LEU 76 B VdWContact
Gly 4 56 N-term LYS 75 B HBAcceptor
Gly 4 56 N-term LYS 75 B VdWContact
Thr 10 62 N-term LEU 76 B Hydrophobic
Thr 10 62 N-term LEU 76 B VdWContact
Tyr 13 68 N-loop LEU 76 B Hydrophobic
Tyr 13 68 N-loop LEU 76 B HBDonor
Tyr 13 68 N-loop LEU 76 B VdWContact
Tyr 13 68 N-loop LYS 75 B VdWContact
Phe 15 70 N-loop THR 73 B Hydrophobic
Phe 15 70 N-loop LYS 75 B Hydrophobic
Phe 15 70 N-loop LYS 75 B VdWContact
Ile 16 71 N-loop LYS 75 B Hydrophobic
Ile 16 71 N-loop LYS 75 B VdWContact
Lys 22 80 N-loop SER 34 B HBDonor
Lys 22 80 N-loop SER 34 B VdWContact
Lys 22 80 N-loop SER 33 B HBDonor
Lys 22 80 N-loop SER 33 B VdWContact
Gln 23 81 N-loop SER 34 B VdWContact
Arg 24 82 N-loop SER 34 B VdWContact
Arg 24 82 N-loop GLU 39 B Cationic
Arg 24 82 N-loop THR 32 B HBDonor
Arg 24 82 N-loop THR 32 B VdWContact
Arg 24 82 N-loop HIS 35 B HBDonor
Arg 24 82 N-loop HIS 35 B CationPi
Arg 24 82 N-loop HIS 35 B VdWContact
Arg 24 82 N-loop SER 33 B VdWContact
Leu 25 83 B1 THR 32 B VdWContact
Leu 25 83 B1 SER 33 B HBDonor
Leu 25 83 B1 SER 33 B VdWContact
Glu 26 84 B1 THR 32 B HBAcceptor
Glu 26 84 B1 THR 32 B VdWContact
Ser 27 85 B1 THR 31 B VdWContact
Ser 27 85 B1 THR 32 B HBAcceptor
Ser 27 85 B1 THR 32 B VdWContact
Tyr 28 86 B1 THR 31 B VdWContact
Tyr 28 86 B1 ARG 30 B Hydrophobic
Tyr 28 86 B1 ARG 30 B HBAcceptor
Tyr 28 86 B1 ARG 30 B HBDonor
Tyr 28 86 B1 ARG 30 B VdWContact
Tyr 28 86 B1 TYR 28 B Hydrophobic
Tyr 28 86 B1 TYR 28 B VdWContact
Arg 29 87 B1 ARG 29 B Hydrophobic
Arg 29 87 B1 ARG 29 B VdWContact
Arg 29 87 B1 SER 27 B HBDonor
Arg 29 87 B1 SER 27 B VdWContact
Arg 29 87 B1 TYR 28 B VdWContact
Arg 30 88 B1 MET 64 B HBDonor
Arg 30 88 B1 MET 64 B VdWContact
Arg 30 88 B1 ASP 68 B HBDonor
Arg 30 88 B1 ASP 68 B Cationic
Arg 30 88 B1 ASP 68 B VdWContact
Arg 30 88 B1 SER 27 B HBAcceptor
Arg 30 88 B1 SER 27 B VdWContact
Arg 30 88 B1 LEU 67 B Hydrophobic
Arg 30 88 B1 LEU 67 B VdWContact
Arg 30 88 B1 TYR 28 B Hydrophobic
Arg 30 88 B1 TYR 28 B HBAcceptor
Arg 30 88 B1 TYR 28 B VdWContact
Thr 31 89 B1 SER 27 B VdWContact
Thr 31 89 B1 LEU 67 B Hydrophobic
Thr 31 89 B1 LEU 67 B VdWContact
Thr 31 89 B1 GLU 26 B HBDonor
Thr 31 89 B1 GLU 26 B VdWContact
Thr 31 89 B1 LYS 70 B Hydrophobic
Thr 31 89 B1 LYS 70 B VdWContact
Thr 32 90 30s-loop LYS 44 B Hydrophobic
Thr 32 90 30s-loop SER 27 B HBDonor
Thr 32 90 30s-loop SER 27 B VdWContact
Ser 34 92 30s-loop ARG 24 B HBAcceptor
Ser 34 92 30s-loop ARG 24 B VdWContact
Ser 34 92 30s-loop GLU 26 B VdWContact
Pro 37 96 30s-loop THR 71 B VdWContact
Glu 39 99 30s-loop THR 71 B VdWContact
Glu 39 99 30s-loop LYS 70 B Hydrophobic
Glu 39 99 30s-loop LYS 70 B HBAcceptor
Glu 39 99 30s-loop LYS 70 B VdWContact
Asp 54 119 50s-loop GLN 72 B VdWContact
Asp 54 119 50s-loop THR 73 B Hydrophobic
Asp 54 119 50s-loop THR 73 B VdWContact
Asp 54 119 50s-loop THR 71 B VdWContact
Asp 54 119 50s-loop LYS 70 B Anionic
Asp 54 119 50s-loop LYS 70 B VdWContact
Pro 55 120 50s-loop GLN 72 B Hydrophobic
Pro 55 120 50s-loop GLN 72 B VdWContact
Pro 55 120 50s-loop THR 73 B HBAcceptor
Pro 55 120 50s-loop THR 73 B VdWContact
Thr 56 121 50s-loop PRO 74 B Hydrophobic
Thr 56 121 50s-loop PRO 74 B VdWContact
Thr 56 121 50s-loop THR 73 B VdWContact
Gln 57 122 50s-loop THR 73 B HBDonor
Gln 57 122 50s-loop THR 73 B VdWContact
Gln 57 122 50s-loop PRO 74 B Hydrophobic
Gln 57 122 50s-loop PRO 74 B VdWContact
Gln 57 122 50s-loop LYS 75 B HBAcceptor
Gln 57 122 50s-loop LYS 75 B VdWContact
Phe 63 128 Helix SER 33 B VdWContact
Met 64 129 Helix ASP 68 B VdWContact
Leu 67 132 Helix SER 33 B VdWContact
Asp 68 133 Helix ARG 30 B HBAcceptor
Asp 68 133 Helix ARG 30 B VdWContact
Lys 69 134 Helix ARG 38 B VdWContact
Lys 70 135 Helix ARG 38 B HBDonor
Lys 70 135 Helix ARG 38 B VdWContact
Lys 70 135 Helix ARG 30 B HBAcceptor
Lys 70 135 Helix ARG 30 B VdWContact
Lys 70 135 Helix GLU 39 B HBDonor
Lys 70 135 Helix GLU 39 B Cationic
Lys 70 135 Helix GLU 39 B VdWContact
Lys 70 135 Helix CYS 36 B HBDonor
Lys 70 135 Helix CYS 36 B VdWContact
Lys 70 135 Helix PRO 37 B VdWContact
Thr 71 136 C-term GLU 39 B VdWContact
Thr 71 136 C-term ASP 54 B VdWContact
Thr 71 136 C-term ARG 38 B VdWContact
Thr 71 136 C-term VAL 41 B Hydrophobic
Thr 71 136 C-term VAL 41 B VdWContact
Thr 71 136 C-term ARG 30 B Hydrophobic
Thr 71 136 C-term ARG 30 B HBAcceptor
Thr 71 136 C-term ARG 30 B VdWContact
Thr 71 136 C-term ALA 40 B VdWContact
Gln 72 137 C-term THR 10 B VdWContact
Gln 72 137 C-term ALA 53 B VdWContact
Gln 72 137 C-term ASP 54 B Hydrophobic
Gln 72 137 C-term ASP 54 B HBDonor
Gln 72 137 C-term ASP 54 B VdWContact
Gln 72 137 C-term ARG 38 B Hydrophobic
Gln 72 137 C-term ARG 38 B VdWContact
Gln 72 137 C-term VAL 41 B VdWContact
Gln 72 137 C-term THR 9 B VdWContact
Gln 72 137 C-term PRO 55 B Hydrophobic
Gln 72 137 C-term PRO 55 B VdWContact
Thr 73 138 C-term VAL 3 B Hydrophobic
Thr 73 138 C-term ALA 53 B VdWContact
Thr 73 138 C-term ASP 54 B VdWContact
Thr 73 138 C-term THR 56 B VdWContact
Thr 73 138 C-term PRO 55 B VdWContact
Thr 73 138 C-term GLN 61 B HBDonor
Thr 73 138 C-term GLN 61 B VdWContact
Thr 73 138 C-term GLN 57 B HBAcceptor
Thr 73 138 C-term GLN 57 B HBDonor
Thr 73 138 C-term GLN 57 B VdWContact
Thr 73 138 C-term VAL 60 B VdWContact
Pro 74 139 C-term ALA 53 B Hydrophobic
Pro 74 139 C-term ALA 53 B VdWContact
Pro 74 139 C-term ASP 54 B VdWContact
Pro 74 139 C-term THR 56 B HBAcceptor
Pro 74 139 C-term THR 56 B VdWContact
Pro 74 139 C-term PHE 15 B Hydrophobic
Pro 74 139 C-term PHE 15 B VdWContact
Pro 74 139 C-term TRP 59 B Hydrophobic
Pro 74 139 C-term GLN 57 B Hydrophobic
Pro 74 139 C-term GLN 57 B VdWContact
Pro 74 139 C-term VAL 60 B VdWContact
Lys 75 140 C-term THR 56 B VdWContact
Lys 75 140 C-term ASN 17 B VdWContact
Lys 75 140 C-term GLN 57 B VdWContact
Leu 76 141 C-term LYS 58 B HBAcceptor
Leu 76 141 C-term LYS 58 B VdWContact
Leu 76 141 C-term THR 56 B VdWContact
Leu 76 141 C-term GLN 57 B VdWContact
Leu 76 141 C-term GLN 1 B VdWContact

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