Interactions for 1ROD — Binding Partner: CXCL8


Structure details

  • Chemokine Chain: B
  • Partner Chain: A
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Chemokine diagram

E S G P H C A N T E 30s-loop S D G R 40s-loop D P A S 50s-loopC-term S A K E L R C Q C I K T Y S K P F H P K F N-term I V R L E K I I I V K L L C L E P I V K K I I E K M L N S D K S N
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Interactions for this Binding Partner

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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Lys 20 81 N-loop GLU 29 A VdWContact
Ile 22 83 B1 GLU 29 A Hydrophobic
Ile 22 83 B1 GLU 29 A VdWContact
Lys 23 84 B1 ASN 36 A Hydrophobic
Lys 23 84 B1 ASN 36 A VdWContact
Lys 23 84 B1 ILE 28 A VdWContact
Lys 23 84 B1 GLU 29 A HBAcceptor
Lys 23 84 B1 GLU 29 A VdWContact
Lys 23 84 B1 SER 30 A VdWContact
Lys 23 84 B1 VAL 27 A VdWContact
Glu 24 85 B1 ARG 26 A Hydrophobic
Glu 24 85 B1 ARG 26 A Anionic
Glu 24 85 B1 ARG 26 A VdWContact
Glu 24 85 B1 ILE 28 A Hydrophobic
Glu 24 85 B1 ILE 28 A VdWContact
Glu 24 85 B1 VAL 27 A VdWContact
Leu 25 86 B1 ARG 26 A VdWContact
Leu 25 86 B1 LEU 25 A VdWContact
Leu 25 86 B1 VAL 27 A Hydrophobic
Leu 25 86 B1 VAL 27 A HBAcceptor
Leu 25 86 B1 VAL 27 A HBDonor
Leu 25 86 B1 VAL 27 A VdWContact
Arg 26 87 B1 GLU 24 A Hydrophobic
Arg 26 87 B1 GLU 24 A Cationic
Arg 26 87 B1 GLU 24 A VdWContact
Arg 26 87 B1 ARG 26 A Hydrophobic
Arg 26 87 B1 ARG 26 A VdWContact
Arg 26 87 B1 LEU 25 A VdWContact
Val 27 88 B1 GLU 24 A VdWContact
Val 27 88 B1 LEU 25 A Hydrophobic
Val 27 88 B1 LEU 25 A HBAcceptor
Val 27 88 B1 LEU 25 A HBDonor
Val 27 88 B1 LEU 25 A VdWContact
Val 27 88 B1 LYS 23 A VdWContact
Ile 28 89 B1 GLU 24 A Hydrophobic
Ile 28 89 B1 GLU 24 A VdWContact
Ile 28 89 B1 LYS 23 A VdWContact
Glu 29 90 30s-loop LYS 20 A VdWContact
Glu 29 90 30s-loop ILE 22 A Hydrophobic
Glu 29 90 30s-loop ILE 22 A VdWContact
Glu 29 90 30s-loop LYS 23 A HBDonor
Glu 29 90 30s-loop LYS 23 A VdWContact
Ser 30 91 30s-loop LYS 23 A VdWContact
Asn 36 97 30s-loop LYS 23 A Hydrophobic

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