Interactions for 1MSH — Binding Partner: CXCL1


Structure details

  • Chemokine Chain: A
  • Partner Chain: B
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Chemokine diagram

K S P G P H C A Q T 30s-loop K N G R 40s-loop N P A S 50s-loopC-term A S V A T E L R C Q C L Q T L Q G I H P K N-term V N V S Q I N E V I A T L L C A K P I V K K I I E K M L N S D K S

Interactions for this Binding Partner

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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Gln 24 B1.3 B1 SER 30 B HBAcceptor
Ser 25 B1.4 B1 VAL 28 B VdWContact
Ser 25 B1.4 B1 LYS 29 B VdWContact
Val 26 B1.5 B1 ASN 27 B VdWContact
Val 26 B1.5 B1 VAL 28 B Hydrophobic
Val 26 B1.5 B1 VAL 28 B HBAcceptor
Val 26 B1.5 B1 VAL 28 B HBDonor
Val 26 B1.5 B1 VAL 28 B VdWContact
Asn 27 B1.6 B1 ASN 27 B VdWContact
Asn 27 B1.6 B1 VAL 26 B VdWContact
Val 28 B1.7 B1 SER 25 B VdWContact
Val 28 B1.7 B1 VAL 26 B Hydrophobic
Val 28 B1.7 B1 VAL 26 B HBAcceptor
Val 28 B1.7 B1 VAL 26 B HBDonor
Val 28 B1.7 B1 VAL 26 B VdWContact
Lys 29 b1b2.4 30s-loop GLN 24 B VdWContact
Lys 29 b1b2.4 30s-loop SER 25 B VdWContact
Ser 30 b1b2.6 30s-loop GLN 24 B HBDonor
Ser 30 b1b2.6 30s-loop GLN 24 B VdWContact
Ile 63 H.7 Helix LEU 67 B Hydrophobic
Ile 63 H.7 Helix LEU 67 B VdWContact
Leu 67 CT.1 C-term ILE 63 B Hydrophobic
Leu 67 CT.1 C-term ILE 63 B VdWContact

Interaction pattern search
(0.00 = no similarity, 1.00 = identical)