Interactions for 2BDN — Binding Partner: 11K2


Structure details

  • Chemokine Chain: A
  • Partner Chain: H,L
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Chemokine diagram

T S S K C P K E A 30s-loop I V A K 40s-loop D P K Q 50s-loopC-term A I N A P V T C C Y N F T N R K I S V Q R N-term I R R Y S A L V I F K T A C I E K W V Q D S M D H L D K Q T
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Interactions for this Binding Partner

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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Arg 30 88 B1 PHE 101 H Hydrophobic
Arg 30 88 B1 PHE 101 H VdWContact
Thr 32 90 30s-loop ARG 98 H HBAcceptor
Thr 32 90 30s-loop ARG 98 H VdWContact
Thr 32 90 30s-loop PHE 101 H Hydrophobic
Thr 32 90 30s-loop PHE 101 H VdWContact
Thr 32 90 30s-loop PHE 103 H Hydrophobic
Ser 34 92 30s-loop GLU 1 H HBDonor
Ser 34 92 30s-loop GLU 1 H VdWContact
Ser 34 92 30s-loop TYR 106 H HBDonor
Ser 34 92 30s-loop TYR 106 H VdWContact
Lys 38 97 30s-loop ASP 31 H Hydrophobic
Lys 38 97 30s-loop ASP 31 H Cationic
Glu 39 99 30s-loop VAL 100 H Hydrophobic
Glu 39 99 30s-loop VAL 100 H HBAcceptor
Glu 39 99 30s-loop VAL 100 H VdWContact
Glu 39 99 30s-loop ARG 98 H Anionic
Glu 39 99 30s-loop PHE 101 H Hydrophobic
Glu 39 99 30s-loop THR 32 H HBAcceptor
Glu 39 99 30s-loop THR 32 H VdWContact
Ala 40 100 30s-loop PHE 101 H VdWContact
Val 41 101 B2 PHE 101 H Hydrophobic
Val 41 101 B2 PHE 101 H VdWContact
Pro 55 120 50s-loop PHE 101 H Hydrophobic
Pro 55 120 50s-loop VAL 100 H Hydrophobic
Pro 55 120 50s-loop VAL 100 H VdWContact
Lys 56 121 50s-loop ASP 52 H HBDonor
Lys 56 121 50s-loop ASP 52 H Cationic
Lys 56 121 50s-loop ASP 52 H VdWContact
Lys 56 121 50s-loop TYR 33 H Hydrophobic
Lys 56 121 50s-loop THR 32 H HBDonor
Lys 56 121 50s-loop THR 32 H VdWContact
Lys 56 121 50s-loop LYS 30 H VdWContact
Lys 56 121 50s-loop VAL 100 H Hydrophobic
Met 64 129 Helix PHE 101 H Hydrophobic
Asp 65 130 Helix TRP 92 L Hydrophobic
Asp 65 130 Helix ARG 32 L HBAcceptor
Asp 65 130 Helix ARG 32 L Anionic
Asp 65 130 Helix ARG 32 L VdWContact
Asp 68 133 Helix TYR 30 L Hydrophobic
Asp 68 133 Helix TRP 92 L Hydrophobic
Asp 68 133 Helix ARG 32 L HBAcceptor
Asp 68 133 Helix ARG 32 L Anionic
Asp 68 133 Helix ARG 32 L VdWContact
Lys 69 134 Helix TRP 92 L VdWContact
Lys 69 134 Helix TYR 30 L Hydrophobic
Lys 69 134 Helix TYR 30 L VdWContact

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