CCL20_HUMAN

  • Alternate name(s): C-C motif chemokine 20
  • Organism: Homo sapiens
  • UniProt ID: P78556 open_in_new


Wild type sequence

Residue N-term   CX   N-loop   B1   30s-loop   B2   40s-loop   B3   50s-loop   Helix   C-term  
  NTc.Cm31 NTc.Cm30 NTc.Cm29 NTc.Cm28 NTc.Cm27 NTc.Cm26 NTc.Cm25 NTc.Cm24 NTc.Cm23 NTc.Cm22 NTc.Cm21 NTc.Cm20 NTc.Cm19 NTc.Cm18 NTc.Cm17 NTc.Cm16 NTc.Cm15 NTc.Cm14 NTc.Cm13 NTc.Cm12 NTc.Cm11 NTc.Cm10 NTc.Cm9 NTc.Cm8 NTc.Cm7 NTc.Cm6 NTc.Cm5 NTc.Cm4 NTc.Cm3 NTc.Cm2 NTc.Cm1   CX.1 CX.5   cxb1.1 cxb1.2 cxb1.5 cxb1.6 cxb1.7 cxb1.8 cxb1.10 cxb1.11 cxb1.14 cxb1.15 cxb1.16   B1.1 B1.2 B1.3 B1.4 B1.5 B1.6 B1.7   b1b2.4 b1b2.6 b1b2.7 b1b2.8 b1b2.9 b1b2.10 b1b2.12 b1b2.13 b1b2.14 b1b2.16   B2.1 B2.2 B2.3 B2.4 B2.5 B2.6   b2b3.2 b2b3.4 b2b3.11 b2b3.12   B3.1 B3.2 B3.3 B3.4   b3h.1 b3h.2 b3h.3 b3h.4   H.1 H.2 H.3 H.4 H.5 H.6 H.7 H.8 H.9 H.10   CT.1 CT.2 CT.3 CT.4 CT.5 CT.6 CT.7  
Wild Type M C C T K S L L L A A L M S V L L L H L C G E S E A A S N F D   C C   L G Y T D R I L H P K   F I V G F T R   Q L A N E G C D I N   A I I F H T   K K K L   S V C A   N P K Q   T W V K Y I V R L L   S K K V K N M  

Snake Plot

Q L A N E G C D I N 30s-loop K K K L 40s-loop N P K Q 50s-loopC-term M C C T K S L L L A A L M S V L L L H L C G E S E A A S N F D C C L G Y T D R I L H P K N-term R T F G V I F A I I F H T A C V S T W V K Y I V R L L S K K V K N M
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List of structures

PDB Method Resolution State Publication date Reference
1M8A - A,B X-ray 1.7 Dimer 2002-07-31 10.1074/JBC.M203907200 open_in_new
2HCI - A,B X-ray 1.81 Dimer 2006-07-04 10.1107/S1744309106006890 open_in_new
2JYO - A Nmr None Monomer 2008-01-01 10.1128/AAC.00805-07 open_in_new
6WWZ - C Cryo-em 3.34 Monomer 2020-06-24 10.1038/S41467-020-16820-6 open_in_new
5UR7 - A,B X-ray 2.0 Dimer 2017-11-22 10.1073/PNAS.1704958114 open_in_new
7T1E - B, C, E, A, D X-ray 1.46 Dimer 2022-12-14 -

Sequence alignment from structures

Position NTc.Cm31 NTc.Cm30 NTc.Cm29 NTc.Cm28 NTc.Cm27 NTc.Cm26 NTc.Cm25 NTc.Cm24 NTc.Cm23 NTc.Cm22 NTc.Cm21 NTc.Cm20 NTc.Cm19 NTc.Cm18 NTc.Cm17 NTc.Cm16 NTc.Cm15 NTc.Cm14 NTc.Cm13 NTc.Cm12 NTc.Cm11 NTc.Cm10 NTc.Cm9 NTc.Cm8 NTc.Cm7 NTc.Cm6 NTc.Cm5 NTc.Cm4 NTc.Cm3 NTc.Cm2 NTc.Cm1 CX.1 CX.5 cxb1.1 cxb1.2 cxb1.5 cxb1.6 cxb1.7 cxb1.8 cxb1.10 cxb1.11 cxb1.14 cxb1.15 cxb1.16 B1.1 B1.2 B1.3 B1.4 B1.5 B1.6 B1.7 b1b2.4 b1b2.6 b1b2.7 b1b2.8 b1b2.9 b1b2.10 b1b2.12 b1b2.13 b1b2.14 b1b2.16 B2.1 B2.2 B2.3 B2.4 B2.5 B2.6 b2b3.2 b2b3.4 b2b3.11 b2b3.12 B3.1 B3.2 B3.3 B3.4 b3h.1 b3h.2 b3h.3 b3h.4 H.1 H.2 H.3 H.4 H.5 H.6 H.7 H.8 H.9 H.10 CT.1 CT.2 CT.3 CT.4 CT.5 CT.6 CT.7
Canonical Sequence M C C T K S L L L A A L M S V L L L H L C G E S E A A S N F D C C L G Y T D R I L H P K F I V G F T R Q L A N E G C D I N A I I F H T K K K L S V C A N P K Q T W V K Y I V R L L S K K V K N M
1M8A - A,B - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - D C C L G Y T D R I L H P K F I V G F T R Q L A N E G C D I N A I I F H T K K K L S V C A N P K Q T W V K Y I V R L L S K - - - - -
2HCI - A,B - - - - - - - - - - - - - - - - - - - - - - - - - - - S N F D C C L G Y T D R I L H P K F I V G F T R Q L A N E G C D I N A I I F H T K K K L S V C A N P K Q T W V K Y I V R L L S K K V K N -
2JYO - A - - - - - - - - - - - - - - - - - - - - - - - - - - A S N F D C C L G Y T D R I L H P K F I V G F T R Q L A N E G C D I N A I I F H T K K K L S V C A N P K Q T W V K Y I V R L L S K K V K N M
6WWZ - C - - - - - - - - - - - - - - - - - - - - - - - - - - A S N F D C C L G Y T D R I L H P K F I V G F T R Q L A N E G C D I N A I I F H T K K K L S V C A N P K Q T W V K Y I V R L L S K K - - - -
5UR7 - A,B - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - D C C L G Y T D R I L H P K F I V G F T R Q L A N E G C D I N A I I F H T K K K L S V C A N P K Q T W V K Y I V R L L C K K V K N M
7T1E - B, C, E, A, D - - - - - - - - - - - - - - - - - - - - - - - - - - A S N F D C C L G Y T D R I L H P K F I V G F T R Q L A N E G C D I N A I I F H T K K K L S V C A N P K Q T W V K Y I V R L L S K K V K N M